# This file created by conda-build 24.7.1
# meta.yaml template originally from:
# /Users/runner/work/bioconda-recipes/bioconda-recipes/recipes/bioconductor-flowcore, last modified Thu Jan  2 21:32:04 2025
# ------------------------------------------------

package:
  name: bioconductor-flowcore
  version: 2.18.0
source:
  md5: b411dca0e1a3795bfb137ff69c12be5c
  patches:
    - Makevars.osx.patch
  url:
    - https://bioarchive.galaxyproject.org/flowCore_2.18.0.tar.gz
    - https://bioconductor.org/packages/3.20/bioc/src/contrib/Archive/flowCore/flowCore_2.18.0.tar.gz
    - https://bioconductor.org/packages/3.20/bioc/src/contrib/flowCore_2.18.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-flowcore/bioconductor-flowcore_2.18.0_src_all.tar.gz
build:
  number: '0'
  rpaths:
    - lib/
    - lib/R/lib/
  run_exports: bioconductor-flowcore >=2.18.0,<2.19.0a0
  string: r44h35d7169_0
requirements:
  build:
    - ca-certificates 2024.12.14 h8857fd0_0
    - cctools_osx-64 1010.6 h00edd4c_2
    - clang 18.1.8 default_h179603d_5
    - clang-18 18.1.8 default_h0c94c6a_5
    - clang_impl_osx-64 18.1.8 h6a44ed1_23
    - clang_osx-64 18.1.8 h7e5c614_23
    - clangxx 18.1.8 default_h179603d_5
    - clangxx_impl_osx-64 18.1.8 h4b7810f_23
    - clangxx_osx-64 18.1.8 h7e5c614_23
    - compiler-rt 18.1.8 h1020d70_1
    - compiler-rt_osx-64 18.1.8 hf2b8a54_1
    - ld64_osx-64 951.9 hc8d1a19_2
    - libclang-cpp18.1 18.1.8 default_h0c94c6a_5
    - libcxx 19.1.6 hf95d169_1
    - libcxx-devel 18.1.8 h7c275be_7
    - libiconv 1.17 hd75f5a5_2
    - libllvm18 18.1.8 h9ce406d_2
    - liblzma 5.6.3 hd471939_1
    - libxml2 2.13.5 he8ee3e7_1
    - libzlib 1.3.1 hd23fc13_2
    - llvm-tools 18.1.8 h9ce406d_2
    - llvm-tools-18 18.1.8 h9ce406d_2
    - make 4.4.1 h00291cd_2
    - ncurses 6.5 hf036a51_1
    - openssl 3.4.0 hd471939_0
    - sigtool 0.1.3 h88f4db0_0
    - tapi 1300.6.5 h390ca13_0
    - zstd 1.5.6 h915ae27_0
  host:
    - _r-mutex 1.0.1 anacondar_1
    - bioconductor-biobase 2.66.0 r44h2f393c0_0
    - bioconductor-biocgenerics 0.52.0 r44hdfd78af_0
    - bioconductor-cytolib 2.18.0 r44h35d7169_0
    - bioconductor-rhdf5lib 1.28.0 r44h2f393c0_0
    - bioconductor-rprotobuflib 2.18.0 r44h35d7169_0
    - bioconductor-s4vectors 0.44.0 r44h2f393c0_0
    - bwidget 1.10.1 h694c41f_0
    - bzip2 1.0.8 hfdf4475_7
    - c-ares 1.34.4 hf13058a_0
    - ca-certificates 2024.12.14 h8857fd0_0
    - cairo 1.18.2 h950ec3b_1
    - cctools_osx-64 1010.6 hadbd6bd_2
    - clang 19.1.6 default_h576c50e_0
    - clang-19 19.1.6 default_h3571c67_0
    - clang_impl_osx-64 19.1.6 h5cba23b_23
    - clang_osx-64 19.1.6 h7e5c614_23
    - clangxx 19.1.6 default_heb2e8d1_0
    - clangxx_impl_osx-64 19.1.6 hdf8cba3_23
    - clangxx_osx-64 19.1.6 h7e5c614_23
    - compiler-rt 19.1.6 h52031e2_0
    - compiler-rt_osx-64 19.1.6 hc6f8467_0
    - curl 8.11.1 h5dec5d8_0
    - font-ttf-dejavu-sans-mono 2.37 hab24e00_0
    - font-ttf-inconsolata 3.000 h77eed37_0
    - font-ttf-source-code-pro 2.038 h77eed37_0
    - font-ttf-ubuntu 0.83 h77eed37_3
    - fontconfig 2.15.0 h37eeddb_1
    - fonts-conda-ecosystem 1 0
    - fonts-conda-forge 1 0
    - freetype 2.12.1 h60636b9_2
    - fribidi 1.0.10 hbcb3906_0
    - gfortran_impl_osx-64 13.2.0 h2bc304d_3
    - gfortran_osx-64 13.2.0 h18f7dce_1
    - gmp 6.3.0 hf036a51_2
    - graphite2 1.3.13 h73e2aa4_1003
    - gsl 2.7 h93259b0_0
    - harfbuzz 10.1.0 h467a7e8_0
    - icu 75.1 h120a0e1_0
    - isl 0.26 imath32_h2e86a7b_101
    - krb5 1.21.3 h37d8d59_0
    - ld64_osx-64 951.9 h9d2de3d_2
    - lerc 4.0.0 hb486fe8_0
    - libasprintf 0.22.5 hdfe23c8_3
    - libblas 3.9.0 8_hc2a6a11_netlib
    - libcblas 3.9.0 8_hc2a6a11_netlib
    - libclang-cpp19.1 19.1.6 default_h3571c67_0
    - libcurl 8.11.1 h5dec5d8_0
    - libcxx 19.1.6 hf95d169_1
    - libcxx-devel 19.1.6 h7c275be_1
    - libdeflate 1.23 he65b83e_0
    - libedit 3.1.20191231 h0678c8f_2
    - libev 4.33 h10d778d_2
    - libexpat 2.6.4 h240833e_0
    - libffi 3.4.2 h0d85af4_5
    - libgettextpo 0.22.5 hdfe23c8_3
    - libgfortran 5.0.0 13_2_0_h97931a8_3
    - libgfortran-devel_osx-64 13.2.0 h80d4556_3
    - libgfortran5 13.2.0 h2873a65_3
    - libglib 2.82.2 hb6ef654_0
    - libiconv 1.17 hd75f5a5_2
    - libintl 0.22.5 hdfe23c8_3
    - libjpeg-turbo 3.0.0 h0dc2134_1
    - liblapack 3.9.0 8_hc2a6a11_netlib
    - libllvm19 19.1.6 hc29ff6c_0
    - liblzma 5.6.3 hd471939_1
    - libnghttp2 1.64.0 hc7306c3_0
    - libpng 1.6.44 h4b8f8c9_0
    - libssh2 1.11.1 h3dc7d44_0
    - libtiff 4.7.0 hb77a491_3
    - libwebp-base 1.5.0 h6cf52b4_0
    - libxml2 2.13.5 hebb159f_1
    - libzlib 1.3.1 hd23fc13_2
    - llvm-openmp 19.1.6 ha54dae1_0
    - llvm-tools 19.1.6 h3fe3016_0
    - llvm-tools-19 19.1.6 he90a8e3_0
    - make 4.4.1 h00291cd_2
    - mpc 1.3.1 h9d8efa1_1
    - mpfr 4.2.1 haed47dc_3
    - ncurses 6.5 hf036a51_1
    - openssl 3.4.0 hd471939_0
    - pango 1.54.0 hf94f63b_4
    - pcre2 10.44 h7634a1b_2
    - pixman 0.44.2 h1fd1274_0
    - r-base 4.4.2 h1f3f453_2
    - r-bh 1.87.0_1 r44hc72bb7e_0
    - r-cpp11 0.5.1 r44hc72bb7e_0
    - r-matrixstats 1.4.1 r44h199b6f9_0
    - r-rcpp 1.0.13_1 r44h2711daa_0
    - readline 8.2 h9e318b2_1
    - sigtool 0.1.3 h88f4db0_0
    - tapi 1300.6.5 h390ca13_0
    - tk 8.6.13 h1abcd95_1
    - tktable 2.10 hba9d6f1_6
    - tzdata 2024b hc8b5060_0
    - zlib 1.3.1 hd23fc13_2
    - zstd 1.5.6 h915ae27_0
  run:
    - bioconductor-biobase >=2.66.0,<2.67.0
    - bioconductor-biobase >=2.66.0,<2.67.0a0
    - bioconductor-biocgenerics >=0.52.0,<0.53.0
    - bioconductor-biocgenerics >=0.52.0,<0.53.0a0
    - bioconductor-cytolib >=2.18.0,<2.19.0
    - bioconductor-cytolib >=2.18.0,<2.19.0a0
    - bioconductor-rprotobuflib >=2.18.0,<2.19.0
    - bioconductor-rprotobuflib >=2.18.0,<2.19.0a0
    - bioconductor-s4vectors >=0.44.0,<0.45.0
    - bioconductor-s4vectors >=0.44.0,<0.45.0a0
    - libblas >=3.9.0,<4.0a0
    - libcxx >=18
    - liblapack >=3.9.0,<4.0a0
    - r-base >=4.4,<4.5.0a0
    - r-base >=4.4,<4.5.0a0
    - r-bh >=1.81.0.0
    - r-cpp11
    - r-matrixstats
    - r-rcpp
test:
  commands:
    - $R -e "library('flowCore')"
about:
  description: Provides S4 data structures and basic functions to deal with flow cytometry
    data.
  home: https://bioconductor.org/packages/3.20/bioc/html/flowCore.html
  license: Artistic-2.0
  summary: 'flowCore: Basic structures for flow cytometry data'
extra:
  additional-platforms:
    - linux-aarch64
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:flowcore
    - doi:10.1186/1471-2105-10-106
