# This file created by conda-build 2.0.7
# meta.yaml template originally from:
# /Users/travis/build/bioconda/bioconda-recipes/recipes/bioconductor-ensembldb, last modified Thu Nov  3 13:29:59 2016
# ------------------------------------------------

package:
    name: bioconductor-ensembldb
    version: 1.6.0
source:
    fn: ensembldb_1.6.0.tar.gz
    md5: 731f44b5af42a5b32bb7863f27ac5dc7
    url: http://bioconductor.org/packages/release/bioc/src/contrib/ensembldb_1.6.0.tar.gz
build:
    number: '0'
    rpaths:
        - lib/R/lib/
        - lib/
requirements:
    build:
        - bioconductor-annotationdbi >=1.31.19
        - bioconductor-annotationhub
        - bioconductor-biobase
        - bioconductor-biocgenerics >=0.15.10
        - bioconductor-genomeinfodb
        - bioconductor-genomicfeatures >=1.23.18
        - bioconductor-genomicranges >=1.23.21
        - bioconductor-iranges
        - bioconductor-rsamtools
        - bioconductor-rtracklayer
        - bioconductor-s4vectors
        - r
        - r-dbi
        - r-rsqlite
    run:
        - bioconductor-annotationdbi >=1.31.19
        - bioconductor-annotationhub
        - bioconductor-biobase
        - bioconductor-biocgenerics >=0.15.10
        - bioconductor-genomeinfodb
        - bioconductor-genomicfeatures >=1.23.18
        - bioconductor-genomicranges >=1.23.21
        - bioconductor-iranges
        - bioconductor-rsamtools
        - bioconductor-rtracklayer
        - bioconductor-s4vectors
        - r
        - r-dbi
        - r-rsqlite
test:
    commands:
        - $R -e "library('ensembldb')"
about:
    home: http://bioconductor.org/packages/release/bioc/html/ensembldb.html
    license: LGPL
    summary: The package provides functions to create and use transcript centric annotation
        databases/packages. The annotation for the databases are directly fetched
        from Ensembl using their Perl API. The functionality and data is similar to
        that of the TxDb packages from the GenomicFeatures package, but, in addition
        to retrieve all gene/transcript models and annotations from the database,
        the ensembldb package provides also a filter framework allowing to retrieve
        annotations for specific entries like genes encoded on a chromosome region
        or transcript models of lincRNA genes.
