Package: DropletUtils
Version: 1.2.1
Date: 2018-11-02
Title: Utilities for Handling Single-Cell Droplet Data
Authors@R: c(
    person("Aaron", "Lun", role = c("aut", "cre"), 
    email = "infinite.monkeys.with.keyboards@gmail.com"), 
    person("Jonathan", "Griffiths", role="ctb"), 
    person("Davis", "McCarthy", role="ctb"))
Depends: R (>= 3.5), BiocParallel, SingleCellExperiment
Imports: S4Vectors, Matrix, methods, utils, stats, edgeR, Rcpp, rhdf5,
        HDF5Array
Suggests: testthat, beachmat, knitr, BiocStyle, rmarkdown
biocViews: SingleCell, Sequencing, RNASeq, GeneExpression,
        Transcriptomics, DataImport, Coverage
Description: Provides a number of utility functions for handling 
    single-cell (RNA-seq) data from droplet technologies such as 10X
    Genomics. This includes data loading, identification of cells from 
    empty droplets, removal of barcode-swapped pseudo-cells, and 
    downsampling of the count matrix.
License: GPL-3
NeedsCompilation: yes
VignetteBuilder: knitr
LinkingTo: Rcpp, beachmat, Rhdf5lib
SystemRequirements: C++11
RoxygenNote: 6.1.0
git_url: https://git.bioconductor.org/packages/DropletUtils
git_branch: RELEASE_3_8
git_last_commit: e862aa8
git_last_commit_date: 2018-11-02
Date/Publication: 2018-11-03
Packaged: 2018-11-04 02:09:20 UTC; biocbuild
Author: Aaron Lun [aut, cre],
  Jonathan Griffiths [ctb],
  Davis McCarthy [ctb]
Maintainer: Aaron Lun <infinite.monkeys.with.keyboards@gmail.com>
Built: R 3.5.1; x86_64-apple-darwin13.4.0; 2018-12-12 00:15:30 UTC; unix
