# This file created by conda-build 3.24.0
# meta.yaml template originally from:
# /Users/runner/work/bioconda-recipes/bioconda-recipes/recipes/bioconductor-deseq2, last modified Sat Jun  3 06:07:34 2023
# ------------------------------------------------

package:
  name: bioconductor-deseq2
  version: 1.38.0
source:
  md5: 98d6970ba89c02b254dcf3be51640425
  url:
    - https://bioarchive.galaxyproject.org/DESeq2_1.38.0.tar.gz
    - https://bioconductor.org/packages/3.16/bioc/src/contrib/Archive/DESeq2/DESeq2_1.38.0.tar.gz
    - https://bioconductor.org/packages/3.16/bioc/src/contrib/DESeq2_1.38.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-deseq2/bioconductor-deseq2_1.38.0_src_all.tar.gz
build:
  number: '1'
  rpaths:
    - lib/
    - lib/R/lib/
  string: r42hc0ef7c4_1
requirements:
  build:
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  host:
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  run:
    - bioconductor-biobase >=2.58.0,<2.59.0
    - bioconductor-biocgenerics >=0.44.0,<0.45.0
    - bioconductor-biocparallel >=1.32.0,<1.33.0
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    - libblas >=3.9.0,<4.0a0
    - libcxx >=15.0.7
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    - r-base >=4.2,<4.3.0a0
    - r-ggplot2
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    - r-rcpp >=0.11.0
    - r-rcpparmadillo
test:
  commands:
    - $R -e "library('DESeq2')"
about:
  description: Estimate variance-mean dependence in count data from high-throughput
    sequencing assays and test for differential expression based on a model using
    the negative binomial distribution.
  home: https://bioconductor.org/packages/3.16/bioc/html/DESeq2.html
  license: LGPL (>= 3)
  license_file: /opt/mambaforge/envs/bioconda/conda-bld/bioconductor-deseq2_1685787737237/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/lib/R/share/licenses/LGPL-3
  summary: Differential gene expression analysis based on the negative binomial distribution
extra:
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:deseq2
    - doi:10.1186/s13059-014-0550-8
    - usegalaxy-eu:deseq2
