addCustomInfo	addCustomInfo
closeWorkspace	openWorkspace
closeWorkspace,flowJoWorkspace-method	openWorkspace
colnames,cytobankExperiment-method	cytobankExperiment
compare.counts	compare.counts
compensate,GatingSet,graphGML-method	compensate-GatingSet-graphGML-method
constructTree	constructTree
cytobank2GatingSet	cytobank2GatingSet
cytobank2GatingSet.cytobankExperiment	cytobank2GatingSet
cytobank2GatingSet.default	cytobank2GatingSet
cytobankExperiment	cytobankExperiment
CytoML.par.get	CytoML.par.get
CytoML.par.init	CytoML.par.init
CytoML.par.set	CytoML.par.get
divaWorkspace-class	divaWorkspace-class
extend	extend
extend.ellipsoidGate	extend
extend.polygonGate	extend
extend.rectangleGate	extend
flowJoWorkspace-class	flowJoWorkspace-class
gating,graphGML,GatingSet-method	gating-methods
GatingSet	GatingSet-methods
GatingSet,character,character-method	GatingSet-methods
GatingSet2cytobank	GatingSet2cytobank
GatingSet2flowJo	GatingSet2flowJo
getChildren,graphGML,character-method	getChildren-graphGML-character-method
getCompensationMatrices	cytobankExperiment
getCompensationMatrices.cytobankExperiment	cytobankExperiment
getCompensationMatrices.graphGML	getCompensationMatrices.graphGML
getFJWSubsetIndices	getFJWSubsetIndices
getGate,graphGML,character-method	getGate-graphGML-character-method
getKeywords	getKeywords
getKeywords,flowJoWorkspace,character-method	getKeywords
getKeywords,flowJoWorkspace,numeric-method	getKeywords
getNodes,graphGML-method	getNodes-graphGML-method
getParent,graphGML,character-method	getParent-graphGML-character-method
getSampleGroups	getSampleGroups
getSampleGroups,divaWorkspace-method	divaWorkspace-class
getSampleGroups,flowJoWorkspace-method	getSampleGroups
getSamples	getSamples
getSamples,divaWorkspace-method	divaWorkspace-class
getSamples,flowJoWorkspace-method	getSamples
getTransformations	cytobankExperiment
getTransformations.cytobankExperiment	cytobankExperiment
getTransformations.graphGML	getTransformations.graphGML
graphGML-class	graphGML-class
markernames,cytobankExperiment-method	cytobankExperiment
matchPath	matchPath
openDiva	openDiva
openWorkspace	openWorkspace
openWorkspace.character	openWorkspace
parse.gateInfo	parse.gateInfo
parseWorkspace	parseWorkspace
parseWorkspace,divaWorkspace-method	divaWorkspace-class
parseWorkspace,flowJoWorkspace-method	parseWorkspace
pData,cytobankExperiment-method	cytobankExperiment
plot,graphGML,missing-method	plot-graphGML-missing-method
print.cytobankExperiment	cytobankExperiment
range.GatingHierarchy	range.GatingHierarchy
read.gatingML.cytobank	read.gatingML.cytobank
sampleNames,cytobankExperiment-method	cytobankExperiment
show,divaWorkspace-method	divaWorkspace-class
show,flowJoWorkspace-method	flowJoWorkspace-class
show,graphGML-method	show-graphGML-method
