# This file created by conda-build 3.18.9
# meta.yaml template originally from:
# /Users/runner/runners/2.160.0/work/bioconda-recipes/bioconda-recipes/recipes/bioconductor-cogaps, last modified Fri Nov  1 22:56:04 2019
# ------------------------------------------------

package:
    name: bioconductor-cogaps
    version: 3.6.0
source:
    md5: e804c00af14a3ca27a2bdcb8e7465e23
    url:
        - https://bioarchive.galaxyproject.org/CoGAPS_3.6.0.tar.gz
        - https://bioconductor.org/packages/3.10/bioc/src/contrib/CoGAPS_3.6.0.tar.gz
        - https://depot.galaxyproject.org/software/bioconductor-cogaps/bioconductor-cogaps_3.6.0_src_all.tar.gz
build:
    number: '0'
    rpaths:
        - lib/
        - lib/R/lib/
    string: r36h6de7cb9_0
requirements:
    build:
        - autoconf 2.69 pl526h1de35cc_9
        - automake 1.16.1 pl526_1003
        - cctools 895 h7512d6f_0
        - clang 4.0.1 h662ec87_0
        - clang_osx-64 4.0.1 h1ce6c1d_17
        - clangxx 4.0.1 hc9b4283_0
        - clangxx_osx-64 4.0.1 h22b1bf0_17
        - compiler-rt 4.0.1 h5487866_0
        - ld64 274.2 h7c2db76_0
        - libcxx 4.0.1 h579ed51_0
        - libcxxabi 4.0.1 hebd6815_0
        - llvm 4.0.1 hc748206_0
        - llvm-lto-tapi 4.0.1 h6701bc3_0
        - m4 1.4.18 h1de35cc_1001
        - make 4.2.1 h1de35cc_2004
        - perl 5.26.2 haec8ef5_1006
    host:
        - _r-mutex 1.0.1 anacondar_1
        - bioconductor-biobase 2.46.0 r36h01d97ff_0
        - bioconductor-biocgenerics 0.32.0 r36_0
        - bioconductor-biocparallel 1.20.0 r36h6de7cb9_0
        - bioconductor-delayedarray 0.12.0 r36h01d97ff_0
        - bioconductor-genomeinfodb 1.22.0 r36_0
        - bioconductor-genomeinfodbdata 1.2.2 r36_0
        - bioconductor-genomicranges 1.38.0 r36h01d97ff_0
        - bioconductor-iranges 2.20.0 r36h01d97ff_0
        - bioconductor-rhdf5 2.30.0 r36h6de7cb9_0
        - bioconductor-rhdf5lib 1.8.0 r36h01d97ff_0
        - bioconductor-s4vectors 0.24.0 r36h01d97ff_0
        - bioconductor-singlecellexperiment 1.8.0 r36_0
        - bioconductor-summarizedexperiment 1.16.0 r36_0
        - bioconductor-xvector 0.26.0 r36h01d97ff_0
        - bioconductor-zlibbioc 1.32.0 r36h01d97ff_0
        - bwidget 1.9.13 0
        - bzip2 1.0.8 h01d97ff_1
        - ca-certificates 2019.9.11 hecc5488_0
        - cairo 1.16.0 he1c11cd_1002
        - cctools 895 1
        - clang 4.0.1 1
        - clang_osx-64 4.0.1 h1ce6c1d_17
        - clangxx 4.0.1 1
        - clangxx_osx-64 4.0.1 h22b1bf0_17
        - compiler-rt 4.0.1 hcfea43d_1
        - curl 7.65.3 h22ea746_0
        - fontconfig 2.13.1 h6b1039f_1001
        - freetype 2.10.0 h24853df_1
        - fribidi 1.0.5 h01d97ff_1002
        - gettext 0.19.8.1 h46ab8bc_1002
        - gfortran_impl_osx-64 7.3.0 hf4212f2_2
        - gfortran_osx-64 7.3.0 h22b1bf0_6
        - glib 2.58.3 h9d45998_1002
        - gmp 6.1.2 h0a44026_1000
        - graphite2 1.3.13 h2098e52_1000
        - gsl 2.5 ha2d443c_1
        - harfbuzz 2.4.0 hd8d2a14_3
        - icu 64.2 h6de7cb9_1
        - isl 0.19 0
        - jpeg 9c h1de35cc_1001
        - krb5 1.16.3 hcfa6398_1001
        - ld64 274.2 1
        - libblas 3.8.0 14_openblas
        - libcblas 3.8.0 14_openblas
        - libcurl 7.65.3 h16faf7d_0
        - libcxx 4.0.1 hcfea43d_1
        - libcxxabi 4.0.1 hcfea43d_1
        - libedit 3.1.20170329 hcfe32e1_1001
        - libffi 3.2.1 h6de7cb9_1006
        - libgfortran 4.0.0 2
        - libiconv 1.15 h01d97ff_1005
        - liblapack 3.8.0 14_openblas
        - libopenblas 0.3.7 h4bb4525_2
        - libpng 1.6.37 h2573ce8_0
        - libssh2 1.8.2 hcdc9a53_2
        - libtiff 4.0.10 hd08fb8f_1003
        - libxml2 2.9.10 h53d96d6_0
        - llvm 4.0.1 1
        - llvm-lto-tapi 4.0.1 1
        - llvm-openmp 8.0.1 h770b8ee_0
        - lz4-c 1.8.3 h6de7cb9_1001
        - make 4.2.1 h1de35cc_2004
        - mpc 1.1.0 h4160ff4_1006
        - mpfr 4.0.2 h44b798e_0
        - ncurses 6.1 h0a44026_1002
        - openssl 1.1.1c h01d97ff_0
        - pango 1.42.4 h6691c8e_1
        - pcre 8.41 h0a44026_1003
        - pixman 0.38.0 h01d97ff_1003
        - r-base 3.6.1 h0300c70_4
        - r-bh 1.69.0_1 r36h6115d3f_1
        - r-bitops 1.0_6 r36h159158b_1003
        - r-catools 1.17.1.2 r36hf99fc2c_1
        - r-cluster 2.1.0 r36h85e41a7_2
        - r-formatr 1.7 r36h6115d3f_1
        - r-futile.logger 1.4.3 r36h6115d3f_1002
        - r-futile.options 1.0.1 r36h6115d3f_1001
        - r-gdata 2.18.0 r36h6115d3f_1002
        - r-gplots 3.0.1.1 r36h6115d3f_1
        - r-gtools 3.8.1 r36h159158b_1003
        - r-kernsmooth 2.23_15 r36h85e41a7_1004
        - r-lambda.r 1.2.4 r36h6115d3f_0
        - r-lattice 0.20_38 r36h159158b_1002
        - r-matrix 1.2_17 r36h159158b_1
        - r-matrixstats 0.55.0 r36h159158b_0
        - r-rcolorbrewer 1.1_2 r36h6115d3f_1002
        - r-rcpp 1.0.2 r36hf99fc2c_0
        - r-rcurl 1.95_4.12 r36h159158b_1
        - r-snow 0.4_3 r36h6115d3f_1001
        - readline 8.0 hcfe32e1_0
        - tk 8.6.9 h2573ce8_1003
        - tktable 2.10 h008db23_3
        - xz 5.2.4 h1de35cc_1001
        - zlib 1.2.11 h0b31af3_1006
        - zstd 1.4.0 ha9f0a20_0
    run:
        - bioconductor-biocparallel >=1.20.0,<1.21.0
        - bioconductor-rhdf5 >=2.30.0,<2.31.0
        - bioconductor-s4vectors >=0.24.0,<0.25.0
        - bioconductor-singlecellexperiment >=1.8.0,<1.9.0
        - bioconductor-summarizedexperiment >=1.16.0,<1.17.0
        - libcxx >=4.0.1
        - r-base >=3.6,<3.7.0a0
        - r-cluster
        - r-gplots
        - r-rcolorbrewer
        - r-rcpp
test:
    commands:
        - $R -e "library('CoGAPS')"
about:
    description: Coordinated Gene Activity in Pattern Sets (CoGAPS) implements a Bayesian
        MCMC matrix factorization algorithm, GAPS, and links it to gene set statistic
        methods to infer biological process activity.  It can be used to perform sparse
        matrix factorization on any data, and when this data represents biomolecules,
        to do gene set analysis.
    home: https://bioconductor.org/packages/3.10/bioc/html/CoGAPS.html
    license: GPL (==2)
    license_file: /Users/runner/miniconda/envs/bioconda/conda-bld/bioconductor-cogaps_1572659183042/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeh/lib/R/share/licenses/GPL-2
    summary: Coordinated Gene Activity in Pattern Sets
extra:
    copy_test_source_files: true
    final: true
