# Clustering Algorithms for Bioconductor

## Documentation for package ‘bluster’ version 1.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

approxSilhouette | Approximate silhouette width
BlusterParam-class | The BlusterParam class
bootstrapStability | Assess cluster stability by bootstrapping
clusterRows | Cluster rows of a matrix
clusterRows-method | Hierarchical clustering
clusterRows-method | K-means clustering
clusterRows-method | Graph-based clustering
clusterRows-method | Two step clustering with vector quantization
HclustParam | Hierarchical clustering
HclustParam-class | Hierarchical clustering
KmeansParam | K-means clustering
KmeansParam-class | K-means clustering
makeKNNGraph | Build a nearest-neighbor graph
makeSNNGraph | Build a nearest-neighbor graph
mergeCommunities | Merge communities from graph-based clustering
neighborPurity | Compute neighborhood purity
neighborsToKNNGraph | Build a nearest-neighbor graph
neighborsToSNNGraph | Build a nearest-neighbor graph
NNGraphParam | Graph-based clustering
NNGraphParam-class | Graph-based clustering
pairwiseModularity | Compute pairwise modularity
pairwiseRand | Compute pairwise Rand indices
show-method | The BlusterParam class
show-method | Hierarchical clustering
show-method | K-means clustering
show-method | Graph-based clustering
show-method | Two step clustering with vector quantization
TwoStepParam | Two step clustering with vector quantization
TwoStepParam-class | Two step clustering with vector quantization
[[-method | The BlusterParam class
[[<--method | The BlusterParam class