# This file created by conda-build 3.21.8
# meta.yaml template originally from:
# /Users/runner/work/bioconda-recipes/bioconda-recipes/recipes/bioconductor-bayesspace, last modified Thu Sep 15 20:22:42 2022
# ------------------------------------------------

package:
  name: bioconductor-bayesspace
  version: 1.4.1
source:
  md5: f608fbb4a3c2b8d70d028fdd0a719422
  url:
    - https://bioarchive.galaxyproject.org/BayesSpace_1.4.1.tar.gz
    - https://bioconductor.org/packages/3.14/bioc/src/contrib/BayesSpace_1.4.1.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-bayesspace/bioconductor-bayesspace_1.4.1_src_all.tar.gz
build:
  number: '1'
  rpaths:
    - lib/
    - lib/R/lib/
  string: r41hb890f52_1
requirements:
  build:
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    - zlib 1.2.12 hfd90126_3
    - zstd 1.5.2 hfa58983_4
  run:
    - bioconductor-biocfilecache >=2.2.0,<2.3.0
    - bioconductor-biocsingular >=1.10.0,<1.11.0
    - bioconductor-rhdf5 >=2.38.0,<2.39.0
    - bioconductor-s4vectors >=0.32.0,<0.33.0
    - bioconductor-scater >=1.22.0,<1.23.0
    - bioconductor-scran >=1.22.0,<1.23.0
    - bioconductor-singlecellexperiment >=1.16.0,<1.17.0
    - bioconductor-summarizedexperiment >=1.24.0,<1.25.0
    - libblas >=3.9.0,<4.0a0
    - libcxx >=14.0.4
    - liblapack >=3.9.0,<4.0a0
    - r-assertthat
    - r-base >=4.1,<4.2.0a0
    - r-coda
    - r-dirichletreg
    - r-ggplot2
    - r-matrix
    - r-mclust
    - r-purrr
    - r-rcpp >=1.0.4.6
    - r-rcpparmadillo
    - r-rcppdist
    - r-rcppprogress
    - r-rcurl
    - r-scales
    - r-xgboost
test:
  commands:
    - $R -e "library('BayesSpace')"
about:
  description: Tools for clustering and enhancing the resolution of spatial gene expression
    experiments. BayesSpace clusters a low-dimensional representation of the gene
    expression matrix, incorporating a spatial prior to encourage neighboring spots
    to cluster together. The method can enhance the resolution of the low-dimensional
    representation into "sub-spots", for which features such as gene expression or
    cell type composition can be imputed.
  home: https://bioconductor.org/packages/3.14/bioc/html/BayesSpace.html
  license: MIT + file LICENSE
  license_file: LICENSE
  summary: Clustering and Resolution Enhancement of Spatial Transcriptomes
extra:
  copy_test_source_files: true
  final: true
