BASiCS-deprecated	BASiCS-deprecated
BASiCS_Chain	BASiCS_Chain
BASiCS_Chain-class	BASiCS_Chain
BASiCS_Chain-methods	BASiCS_Chain-methods
BASiCS_DenoisedCounts	BASiCS_DenoisedCounts
BASiCS_DenoisedRates	BASiCS_DenoisedRates
BASiCS_DetectHVG	BASiCS_DetectHVG_LVG
BASiCS_DetectHVG_LVG	BASiCS_DetectHVG_LVG
BASiCS_DetectLVG	BASiCS_DetectHVG_LVG
BASiCS_D_TestDE	BASiCS_D_TestDE
BASiCS_Filter	BASiCS_Filter
BASiCS_LoadChain	BASiCS_LoadChain
BASiCS_MCMC	BASiCS_MCMC
BASiCS_showFit	BASiCS_showFit-BASiCS_Chain-method
BASiCS_showFit,BASiCS_Chain-method	BASiCS_showFit-BASiCS_Chain-method
BASiCS_showFit-BASiCS_Chain-method	BASiCS_showFit-BASiCS_Chain-method
BASiCS_Sim	BASiCS_Sim
BASiCS_Summary	BASiCS_Summary
BASiCS_Summary-class	BASiCS_Summary
BASiCS_Summary-methods	BASiCS_Summary-methods
BASiCS_TestDE	BASiCS_TestDE
BASiCS_VarianceDecomp	BASiCS_VarianceDecomp
BASiCS_VarThresholdSearchHVG	BASiCS_VarThresholdSearchHVG_LVG
BASiCS_VarThresholdSearchHVG_LVG	BASiCS_VarThresholdSearchHVG_LVG
BASiCS_VarThresholdSearchLVG	BASiCS_VarThresholdSearchHVG_LVG
ChainRNA	ChainRNA
ChainRNAReg	ChainRNAReg
ChainSC	ChainSC
ChainSCReg	ChainSCReg
colnames	colnames-BASiCS_Chain-method
colnames,BASiCS_Chain-method	colnames-BASiCS_Chain-method
displayChainBASiCS	displayChainBASiCS-BASiCS_Chain-method
displayChainBASiCS,BASiCS_Chain-method	displayChainBASiCS-BASiCS_Chain-method
displayChainBASiCS-BASiCS_Chain-method	displayChainBASiCS-BASiCS_Chain-method
displaySummaryBASiCS	displaySummaryBASiCS-BASiCS_Summary-method
displaySummaryBASiCS,BASiCS_Summary-method	displaySummaryBASiCS-BASiCS_Summary-method
displaySummaryBASiCS-BASiCS_Summary-method	displaySummaryBASiCS-BASiCS_Summary-method
makeExampleBASiCS_Data	makeExampleBASiCS_Data
newBASiCS_Chain	newBASiCS_Chain
newBASiCS_Data	newBASiCS_Data
plot	plot-BASiCS_Chain-method
plot,BASiCS_Chain,ANY-method	plot-BASiCS_Chain-method
plot,BASiCS_Chain-method	plot-BASiCS_Chain-method
plot,BASiCS_Summary,ANY-method	plot-BASiCS_Summary-method
plot,BASiCS_Summary-method,	plot-BASiCS_Summary-method
plot-BASiCS_Chain-method	plot-BASiCS_Chain-method
plot-BASiCS_Summary-method	plot-BASiCS_Summary-method
rownames	rownames-BASiCS_Chain-method
rownames,BASiCS_Chain-method	rownames-BASiCS_Chain-method
show,BASiCS_Chain-method	BASiCS_Chain-methods
show,BASiCS_Summary-method	BASiCS_Summary-methods
subset	subset-BASiCS_Chain-method
subset,BASiCS_Chain-method	subset-BASiCS_Chain-method
Summary	Summary-BASiCS_Chain-method
Summary,BASiCS_Chain-method	Summary-BASiCS_Chain-method
updateObject,BASiCS_Chain-method	BASiCS_Chain-methods
