ASpli-package	ASpli-package
altPSI	acc_AS
altPSI,ASpliAS-method	ASpliAS-class
AsDiscover	AsDiscover-methods
AsDiscover,ASpliCounts-method	ASpliCounts-class
ASpli	ASpli-package
ASpliAS-class	ASpliAS-class
ASpliCounts	ASpliCounts
ASpliCounts-class	ASpliCounts-class
ASpliDU-class	ASpliDU-class
ASpliFeatures-class	ASpliFeatures-class
binGenome	binGenome
binGenome,TxDb-method	binGenome-methods
binGenome-methods	binGenome-methods
binsDU	acc_DU
binsDU,ASpliDU-method	ASpliDU-class
countsb	acc_counts
countsb,ASpliCounts-method	ASpliCounts-class
countse1i	acc_counts
countse1i,ASpliCounts-method	ASpliCounts-class
countsg	acc_counts
countsg,ASpliCounts-method	ASpliCounts-class
countsie2	acc_counts
countsie2,ASpliCounts-method	ASpliCounts-class
countsj	acc_counts
countsj,ASpliCounts-method	ASpliCounts-class
DUreport	DUreport
DUreport,ASpliCounts-method	ASpliCounts-class
DUreport_DEXSeq	DUreport_DEXSeq
DUreport_DEXSeq,ASpliCounts-method	ASpliCounts-class
esPSI	acc_AS
esPSI,ASpliAS-method	ASpliAS-class
featuresb	acc_features
featuresb,ASpliFeatures-method	ASpliFeatures-class
featuresg	acc_features
featuresg,ASpliFeatures-method	ASpliFeatures-class
featuresj	acc_features
featuresj,ASpliFeatures-method	ASpliFeatures-class
genesDE	acc_DU
genesDE,ASpliDU-method	ASpliDU-class
irPIR	acc_AS
irPIR,ASpliAS-method	ASpliAS-class
joint	acc_AS
joint,ASpliAS-method	ASpliAS-class
junctionsDU	acc_DU
junctionsDU,ASpliDU-method	ASpliDU-class
junctionsPIR	acc_AS
junctionsPIR,ASpliAS-method	ASpliAS-class
junctionsPSI	acc_AS
junctionsPSI,ASpliAS-method	ASpliAS-class
loadBAM	loadBAM
plotTopTags	plotTopTags
rds	rds
rds,ASpliCounts-method	ASpliCounts-class
rdsb	acc_counts
rdsb,ASpliCounts-method	ASpliCounts-class
rdsg	acc_counts
rdsg,ASpliCounts-method	ASpliCounts-class
readCounts	readCounts
readCounts,ASpliFeatures-method	ASpliFeatures-class
show,ASpliAS-method	show-methods
show,ASpliCounts-method	show-methods
show,ASpliDU-method	show-methods
show,ASpliFeatures-method	show-methods
show-methods	show-methods
writeAll	write
writeAll,ANY-method	write-methods
writeAS	write
writeAS,ASpliAS-method	ASpliAS-class
writeAS-methods	write-methods
writeCounts	write
writeCounts,ASpliCounts-method	ASpliCounts-class
writeCounts-methods	write-methods
writeDU	write
writeDU,ASpliDU-method	ASpliDU-class
writeDU-methods	write-methods
writeRds	write
writeRds,ASpliCounts-method	ASpliCounts-class
writeRds-methods	write-methods
