# This file created by conda-build 3.24.0
# meta.yaml template originally from:
# /opt/recipe, last modified Mon Nov 27 16:14:24 2023
# ------------------------------------------------

package:
  name: visor
  version: 1.1.2.1
source:
  sha256: 8cb8c21414c70f037263b70d217ed89532ffa26ca0a50ea0a239e5a87c1d6b0e
  url: https://github.com/davidebolo1993/VISOR/archive/v1.1.2.1.tar.gz
build:
  entry_points:
    - VISOR=VISOR.VISOR:main
  noarch: python
  number: '0'
  run_exports:
    - visor >=1.1.2.1,<2.0a0
  script: /opt/conda/conda-bld/visor_1701102030525/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/bin/python
    -m pip install . -vv
  string: pyh7cba7a3_0
requirements:
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - bzip2 1.0.8 hd590300_5
    - ca-certificates 2023.11.17 hbcca054_0
    - ld_impl_linux-64 2.40 h41732ed_0
    - libffi 3.4.2 h7f98852_5
    - libgcc-ng 13.2.0 h807b86a_3
    - libgomp 13.2.0 h807b86a_3
    - libnsl 2.0.1 hd590300_0
    - libsqlite 3.44.2 h2797004_0
    - libuuid 2.38.1 h0b41bf4_0
    - libzlib 1.2.13 hd590300_5
    - ncurses 6.4 h59595ed_2
    - openssl 3.2.0 hd590300_0
    - pip 23.3.1 pyhd8ed1ab_0
    - python 3.10.13 hd12c33a_0_cpython
    - readline 8.2 h8228510_1
    - setuptools 68.2.2 pyhd8ed1ab_0
    - tk 8.6.13 noxft_h4845f30_101
    - tzdata 2023c h71feb2d_0
    - wheel 0.42.0 pyhd8ed1ab_0
    - xz 5.2.6 h166bdaf_0
  run:
    - badread >=0.4.0
    - mappy >=2.17
    - minimap2 >=2.17
    - numpy >=1.15.3
    - plotly ==3.10.0
    - pybedtools >=0.8.0
    - pyfaidx >=0.5.5.2
    - pysam >=0.15.0
    - python
    - pywgsim >=0.3.3
    - samtools >=1.9
test:
  commands:
    - pip check
    - VISOR --help
  imports:
    - VISOR
  requires:
    - pip
about:
  home: https://github.com/davidebolo1993/VISOR.git
  license: LGPL-3.0
  license_file: LICENSE.txt
  summary: Haplotype-aware structural variants simulator for short, long and linked
    reads
extra:
  copy_test_source_files: true
  final: true
  recipe-maintainers:
    - tdido
