#      seq                                                    seq                      ftr        ftr          ftr  num  sgm   seq  seq   mdl  mdl  sgm               5'     3'  5'   3' 
#idx   name                                                   len  p/f   model         type       name         idx  sgm  idx  from   to  from   to  len  str  trc     pp     pp  gap  gap
#----  -----------------------------------------------------  ---  ----  ------------  ---------  -----------  ---  ---  ---  ----  ---  ----  ---  ---  ---  ---  -----  -----  ---  ---
1.1.1  entoy.delcds                                           123  PASS  entoy.delcds  CDS        protein_one    1    1    1    11   31    11   31   21    +  no   0.975  0.975  no   no 
1.2.1  entoy.delcds                                           123  PASS  entoy.delcds  CDS        protein_two    2    1    1    42   62    42   62   21    +  no   0.975  0.975  no   no 
1.3.1  entoy.delcds                                           123  PASS  entoy.delcds  stem_loop  SL1            3    3    1    73   78    73   78    6    +  no   0.975  0.975  no   no 
1.3.2  entoy.delcds                                           123  PASS  entoy.delcds  stem_loop  SL1            3    3    2    80   82    80   82    3    +  no   0.975  0.975  no   no 
1.3.3  entoy.delcds                                           123  PASS  entoy.delcds  stem_loop  SL1            3    3    3    85   93    85   93    9    +  no   0.975  0.975  no   no 
#
2.1.1  entoy.delcds/cds3-deleted/1-70,96-123                   98  FAIL  entoy.delcds  CDS        protein_one    1    1    1    11   31    11   31   21    +  no   0.975  0.975  no   no 
2.2.1  entoy.delcds/cds3-deleted/1-70,96-123                   98  FAIL  entoy.delcds  CDS        protein_two    2    1    1    42   62    42   62   21    +  no   0.975  0.975  no   no 
#
3.1.1  entoy.delcds/cds3-sgm1-deleted/1-70,79-123             115  FAIL  entoy.delcds  CDS        protein_one    1    1    1    11   31    11   31   21    +  no   0.975  0.975  no   no 
3.2.1  entoy.delcds/cds3-sgm1-deleted/1-70,79-123             115  FAIL  entoy.delcds  CDS        protein_two    2    1    1    42   62    42   62   21    +  no   0.975  0.975  no   no 
3.3.1  entoy.delcds/cds3-sgm1-deleted/1-70,79-123             115  FAIL  entoy.delcds  stem_loop  SL1            3    3    2    73   74    81   82    2    +  no       -    0.9  yes  no 
3.3.2  entoy.delcds/cds3-sgm1-deleted/1-70,79-123             115  FAIL  entoy.delcds  stem_loop  SL1            3    3    3    77   85    85   93    9    +  no   0.975  0.975  no   no 
#
4.1.1  entoy.delcds/cds3-sgm2-deleted/1-79,84-123             119  FAIL  entoy.delcds  CDS        protein_one    1    1    1    11   31    11   31   21    +  no   0.975  0.975  no   no 
4.2.1  entoy.delcds/cds3-sgm2-deleted/1-79,84-123             119  FAIL  entoy.delcds  CDS        protein_two    2    1    1    42   62    42   62   21    +  no   0.975  0.975  no   no 
4.3.1  entoy.delcds/cds3-sgm2-deleted/1-79,84-123             119  FAIL  entoy.delcds  stem_loop  SL1            3    3    1    73   78    73   78    6    +  no   0.975    0.9  no   no 
4.3.2  entoy.delcds/cds3-sgm2-deleted/1-79,84-123             119  FAIL  entoy.delcds  stem_loop  SL1            3    3    3    81   89    85   93    9    +  no     0.9  0.975  no   no 
#
5.1.1  entoy.delcds/cds3-sgm3-deleted/1-83,97-123             110  FAIL  entoy.delcds  CDS        protein_one    1    1    1    11   31    11   31   21    +  no   0.975  0.975  no   no 
5.2.1  entoy.delcds/cds3-sgm3-deleted/1-83,97-123             110  FAIL  entoy.delcds  CDS        protein_two    2    1    1    42   62    42   62   21    +  no   0.975  0.975  no   no 
5.3.1  entoy.delcds/cds3-sgm3-deleted/1-83,97-123             110  FAIL  entoy.delcds  stem_loop  SL1            3    3    1    73   78    73   78    6    +  no   0.975  0.975  no   no 
5.3.2  entoy.delcds/cds3-sgm3-deleted/1-83,97-123             110  FAIL  entoy.delcds  stem_loop  SL1            3    3    2    80   82    80   82    3    +  no   0.975    0.9  no   no 
#
6.1.1  entoy.delcds/cds3-sgm1and2-deleted/1-65,87-123         102  FAIL  entoy.delcds  CDS        protein_one    1    1    1    11   31    11   31   21    +  no   0.975  0.975  no   no 
6.2.1  entoy.delcds/cds3-sgm1and2-deleted/1-65,87-123         102  FAIL  entoy.delcds  CDS        protein_two    2    1    1    42   62    42   62   21    +  no   0.975  0.975  no   no 
6.3.1  entoy.delcds/cds3-sgm1and2-deleted/1-65,87-123         102  FAIL  entoy.delcds  stem_loop  SL1            3    3    3    66   72    87   93    7    +  no       -  0.975  yes  no 
#
7.1.1  entoy.delcds/cds3-sgm2and3-deleted/1-79,97-123         106  FAIL  entoy.delcds  CDS        protein_one    1    1    1    11   31    11   31   21    +  no   0.975  0.975  no   no 
7.2.1  entoy.delcds/cds3-sgm2and3-deleted/1-79,97-123         106  FAIL  entoy.delcds  CDS        protein_two    2    1    1    42   62    42   62   21    +  no   0.975  0.975  no   no 
7.3.1  entoy.delcds/cds3-sgm2and3-deleted/1-79,97-123         106  FAIL  entoy.delcds  stem_loop  SL1            3    3    1    73   78    73   78    6    +  no   0.975    0.8  no   no 
#
8.1.1  entoy.delcds/cds3-sgm1and3-deleted/1-70,79..84,97-123  102  FAIL  entoy.delcds  CDS        protein_one    1    1    1    11   31    11   31   21    +  no   0.975  0.975  no   no 
8.2.1  entoy.delcds/cds3-sgm1and3-deleted/1-70,79..84,97-123  102  FAIL  entoy.delcds  CDS        protein_two    2    1    1    42   62    42   62   21    +  no   0.975  0.975  no   no 
8.3.1  entoy.delcds/cds3-sgm1and3-deleted/1-70,79..84,97-123  102  FAIL  entoy.delcds  stem_loop  SL1            3    3    2    72   74    80   82    3    +  no     0.5    0.5  no   no 
