# This file created by conda-build 24.7.1
# meta.yaml template originally from:
# /opt/recipe, last modified Fri Jun 20 16:15:21 2025
# ------------------------------------------------

package:
  name: squirrel
  version: 1.1.6
source:
  sha256: 86492dcef4d432bea1c0dc602bac101c4cb0964df8cb4fd6f290780afe540e20
  url: https://github.com/aineniamh/squirrel/archive/refs/tags/1.1.6.tar.gz
build:
  entry_points:
    - squirrel = squirrel.command:main
  noarch: python
  number: '0'
  run_exports:
    - squirrel >=1.1.6,<2.0a0
  script: /opt/conda/conda-bld/squirrel_1750436309048/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/bin/python
    -m pip install . --no-deps --no-build-isolation --no-cache-dir -vvv
  string: pyhdfd78af_0
requirements:
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - bzip2 1.0.8 h4bc722e_7
    - ca-certificates 2025.6.15 hbd8a1cb_0
    - ld_impl_linux-64 2.43 h1423503_5
    - libexpat 2.7.0 h5888daf_0
    - libffi 3.4.6 h2dba641_1
    - libgcc 15.1.0 h767d61c_2
    - libgcc-ng 15.1.0 h69a702a_2
    - libgomp 15.1.0 h767d61c_2
    - liblzma 5.8.1 hb9d3cd8_2
    - libmpdec 4.0.0 hb9d3cd8_0
    - libsqlite 3.50.1 hee588c1_1
    - libuuid 2.38.1 h0b41bf4_0
    - libzlib 1.3.1 hb9d3cd8_2
    - ncurses 6.5 h2d0b736_3
    - openssl 3.5.0 h7b32b05_1
    - pip 25.1.1 pyh145f28c_0
    - python 3.13.5 hec9711d_102_cp313
    - python_abi 3.13 7_cp313
    - readline 8.2 h8c095d6_2
    - setuptools 80.9.0 pyhff2d567_0
    - tk 8.6.13 noxft_hd72426e_102
    - tzdata 2025b h78e105d_0
  run:
    - baltic
    - biopython >=1.70
    - gofasta
    - iqtree
    - jclusterfunk >=0.0.25
    - mako
    - matplotlib-base >=3.3.1
    - minimap2
    - pandas
    - python >=3.7
    - seaborn-base
    - snakemake-minimal <8
    - tabulate
test:
  commands:
    - squirrel --help
about:
  dev_url: https://github.com/aineniamh/squirrel
  doc_url: https://github.com/aineniamh/squirrel/blob/1.1.6/README.md
  home: https://github.com/aineniamh/squirrel
  license: GPL-3.0-only
  license_family: GPL3
  license_file: LICENSE
  summary: Some QUIck Reconstruction to Resolve Evolutionary Links.
extra:
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:squirrel
    - usegalaxy-eu:squirrel_phylo
    - usegalaxy-eu:squirrel_qc
