ARIBA run with this command:
/opt/conda/conda-bld/seroba_1655470988752/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeh/bin/ariba prepareref prepareref -f /opt/conda/conda-bld/seroba_1655470988752/work/temp_aribaXpt2421q3/temp_fasta_ref.fasta -m /opt/conda/conda-bld/seroba_1655470988752/work/temp_aribaXpt2421q3/temp_meta_ref.tsv --max_noncoding_length 50000 --cdhit_clusters /opt/conda/conda-bld/seroba_1655470988752/work/temp_aribaXpt2421q3/cdhit_cluster_ref /opt/conda/conda-bld/seroba_1655470988752/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeh/share/seroba-1.0.2/database/ariba_db/28A/ref
from this directory: /opt/conda/conda-bld/seroba_1655470988752/work

ARIBA version: 2.14.6

External dependencies:
bowtie2	2.2.5	/opt/conda/conda-bld/seroba_1655470988752/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeh/bin/bowtie2
cdhit	4.8.1	/opt/conda/conda-bld/seroba_1655470988752/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeh/bin/cd-hit-est
nucmer	3.1	/opt/conda/conda-bld/seroba_1655470988752/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeh/bin/nucmer

External dependencies OK: True

Python version:
3.9.13 | packaged by conda-forge | (main, May 27 2022, 16:56:21) 
[GCC 10.3.0]

Python packages:
ariba	2.14.6	/opt/conda/conda-bld/seroba_1655470988752/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeh/lib/python3.9/site-packages/ariba/__init__.py
bs4	4.11.1	/opt/conda/conda-bld/seroba_1655470988752/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeh/lib/python3.9/site-packages/bs4/__init__.py
dendropy	4.5.2	/opt/conda/conda-bld/seroba_1655470988752/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeh/lib/python3.9/site-packages/dendropy/__init__.py
pyfastaq	3.17.0	/opt/conda/conda-bld/seroba_1655470988752/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeh/lib/python3.9/site-packages/pyfastaq/__init__.py
pymummer	0.11.0	/opt/conda/conda-bld/seroba_1655470988752/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeh/lib/python3.9/site-packages/pymummer/__init__.py
pysam	0.18.0	/opt/conda/conda-bld/seroba_1655470988752/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeh/lib/python3.9/site-packages/pysam/__init__.py

Python packages OK: True

Everything looks OK: True
