from ..preprocessing import pca
from ._tsne import tsne
from ._umap import umap
from ._diffmap import diffmap
from ._draw_graph import draw_graph

from ._paga import (
    paga,
    paga_degrees,
    paga_expression_entropies,
    paga_compare_paths,
)
from ._rank_genes_groups import rank_genes_groups, filter_rank_genes_groups
from ._dpt import dpt
from ._leiden import leiden
from ._louvain import louvain
from ._sim import sim
from ._score_genes import score_genes, score_genes_cell_cycle
from ._dendrogram import dendrogram
from ._embedding_density import embedding_density
from ._marker_gene_overlap import marker_gene_overlap
from ._ingest import ingest, Ingest
