# scPred - accurate supervised method for cell-type classification from single-cell RNA-seq data

## Documentation for package ‘scPred’ version 1.9.0

- DESCRIPTION file.

## Help Pages

.plot_probabilities | Plot training probabilities
crossTab | Gets contingency table
crossTab-method | Gets contingency table
getFeatureSpace | Get discriminant feature space
get_classifiers | Get classification models
get_classifiers-method | Get classification models
get_classifiers-method | Get classification models
get_metadata | Get metadata from scPred object
get_metadata-method | Get metadata from scPred object
get_metadata-method | Get metadata from scPred object
get_probabilities | Get training probabilities
get_probabilities-method | Get training probabilities
get_probabilities-method | Get training probabilities
get_scpred | Get scPred object
get_scpred-method | Get scPred object
pbmc_1 | A random sample of PBMCs from individual 1
pbmc_2 | A random sample of PBMCs from individual 2
plot_probabilities | Plot training probabilities
plot_probabilities-method | Plot training probabilities
plot_probabilities-method | Plot training probabilities
print.scPred | show
scPred | Definition of 'scPred' class
scPred-class | Definition of 'scPred' class
scPredict | Predict cell classes from a new dataset using a trained model
show-method | show
trainModel | Train a prediction model