# This file created by conda-build 3.21.8
# meta.yaml template originally from:
# /opt/recipe, last modified Mon Nov  7 22:49:52 2022
# ------------------------------------------------

package:
  name: r-noisyr
  version: 1.0.0
source:
  sha256: b98de24f1963c676b0b6457644a7648a5a642ac19e1cb585899a1285cbefdb16
  url:
    - https://cran.r-project.org/src/contrib/Archive/noisyr/noisyr_1.0.0.tar.gz
    - https://cran.r-project.org/src/contrib/noisyr_1.0.0.tar.gz
build:
  noarch: generic
  number: '1'
  rpaths:
    - lib/
    - lib/R/lib/
  string: r42h3342da4_1
requirements:
  build: []
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - _r-mutex 1.0.1 anacondar_1
    - argcomplete 2.0.0 pyhd8ed1ab_0
    - binutils_impl_linux-64 2.39 h6ceecb4_0
    - bioconductor-biocgenerics 0.44.0 r42hdfd78af_0
    - bioconductor-biocparallel 1.32.0 r42hc247a5b_0
    - bioconductor-biostrings 2.66.0 r42hc0cfd56_0
    - bioconductor-data-packages 20221107 hdfd78af_1
    - bioconductor-genomeinfodb 1.34.1 r42hdfd78af_0
    - bioconductor-genomeinfodbdata 1.2.9 r42hdfd78af_0
    - bioconductor-genomicranges 1.50.0 r42hc0cfd56_0
    - bioconductor-iranges 2.32.0 r42hc0cfd56_0
    - bioconductor-preprocesscore 1.60.0 r42hc0cfd56_0
    - bioconductor-rhtslib 2.0.0 r42hc0cfd56_0
    - bioconductor-rsamtools 2.14.0 r42hc247a5b_0
    - bioconductor-s4vectors 0.36.0 r42hc0cfd56_0
    - bioconductor-xvector 0.38.0 r42hc0cfd56_0
    - bioconductor-zlibbioc 1.44.0 r42hc0cfd56_0
    - bwidget 1.9.14 ha770c72_1
    - bzip2 1.0.8 h7f98852_4
    - c-ares 1.18.1 h7f98852_0
    - ca-certificates 2022.9.24 ha878542_0
    - cairo 1.16.0 ha61ee94_1014
    - curl 7.86.0 h2283fc2_1
    - expat 2.5.0 h27087fc_0
    - font-ttf-dejavu-sans-mono 2.37 hab24e00_0
    - font-ttf-inconsolata 3.000 h77eed37_0
    - font-ttf-source-code-pro 2.038 h77eed37_0
    - font-ttf-ubuntu 0.83 hab24e00_0
    - fontconfig 2.14.1 hc2a2eb6_0
    - fonts-conda-ecosystem 1 0
    - fonts-conda-forge 1 0
    - freetype 2.12.1 hca18f0e_0
    - fribidi 1.0.10 h36c2ea0_0
    - gcc_impl_linux-64 12.2.0 hcc96c02_19
    - gettext 0.21.1 h27087fc_0
    - gfortran_impl_linux-64 12.2.0 h55be85b_19
    - graphite2 1.3.13 h58526e2_1001
    - gsl 2.7 he838d99_0
    - gxx_impl_linux-64 12.2.0 hcc96c02_19
    - harfbuzz 5.3.0 h418a68e_0
    - icu 70.1 h27087fc_0
    - importlib-metadata 4.11.4 py310hff52083_0
    - importlib_metadata 4.11.4 hd8ed1ab_0
    - jpeg 9e h166bdaf_2
    - jq 1.6 h36c2ea0_1000
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - keyutils 1.6.1 h166bdaf_0
    - krb5 1.19.3 h08a2579_0
    - ld_impl_linux-64 2.39 hc81fddc_0
    - lerc 4.0.0 h27087fc_0
    - libblas 3.9.0 16_linux64_openblas
    - libcblas 3.9.0 16_linux64_openblas
    - libcurl 7.86.0 h2283fc2_1
    - libdeflate 1.14 h166bdaf_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 h516909a_1
    - libffi 3.4.2 h7f98852_5
    - libgcc-devel_linux-64 12.2.0 h3b97bd3_19
    - libgcc-ng 12.2.0 h65d4601_19
    - libgfortran-ng 12.2.0 h69a702a_19
    - libgfortran5 12.2.0 h337968e_19
    - libglib 2.74.1 h606061b_1
    - libgomp 12.2.0 h65d4601_19
    - libiconv 1.17 h166bdaf_0
    - liblapack 3.9.0 16_linux64_openblas
    - libnghttp2 1.47.0 hff17c54_1
    - libnsl 2.0.0 h7f98852_0
    - libopenblas 0.3.21 pthreads_h78a6416_3
    - libpng 1.6.38 h753d276_0
    - libsanitizer 12.2.0 h46fd767_19
    - libsqlite 3.39.4 h753d276_0
    - libssh2 1.10.0 hf14f497_3
    - libstdcxx-devel_linux-64 12.2.0 h3b97bd3_19
    - libstdcxx-ng 12.2.0 h46fd767_19
    - libtiff 4.4.0 h55922b4_4
    - libuuid 2.32.1 h7f98852_1000
    - libwebp-base 1.2.4 h166bdaf_0
    - libxcb 1.13 h7f98852_1004
    - libxml2 2.10.3 h7463322_0
    - libzlib 1.2.13 h166bdaf_4
    - make 4.3 hd18ef5c_1
    - ncurses 6.3 h27087fc_1
    - oniguruma 6.9.8 h166bdaf_0
    - openssl 3.0.7 h166bdaf_0
    - pango 1.50.11 h382ae3d_0
    - pcre2 10.40 hc3806b6_0
    - pip 22.3.1 pyhd8ed1ab_0
    - pixman 0.40.0 h36c2ea0_0
    - pthread-stubs 0.4 h36c2ea0_1001
    - python 3.10.6 ha86cf86_0_cpython
    - python_abi 3.10 2_cp310
    - pyyaml 6.0 py310h5764c6d_5
    - r-backports 1.4.1 r42h06615bd_1
    - r-base 4.2.2 hb87df5d_1
    - r-bh 1.78.0_0 r42hc72bb7e_1
    - r-bitops 1.0_7 r42h06615bd_1
    - r-brio 1.1.3 r42h06615bd_1
    - r-callr 3.7.3 r42hc72bb7e_0
    - r-cli 3.4.1 r42h7525677_1
    - r-codetools 0.2_18 r42hc72bb7e_1
    - r-colorspace 2.0_3 r42h06615bd_1
    - r-cpp11 0.4.3 r42hc72bb7e_0
    - r-crayon 1.5.2 r42hc72bb7e_1
    - r-desc 1.4.2 r42hc72bb7e_1
    - r-diffobj 0.3.5 r42h06615bd_1
    - r-digest 0.6.30 r42h7525677_0
    - r-doparallel 1.0.17 r42hc72bb7e_1
    - r-dplyr 1.0.10 r42h7525677_1
    - r-ellipsis 0.3.2 r42h06615bd_1
    - r-evaluate 0.18 r42hc72bb7e_0
    - r-fansi 1.0.3 r42h06615bd_1
    - r-farver 2.1.1 r42h7525677_1
    - r-foreach 1.5.2 r42hc72bb7e_1
    - r-formatr 1.12 r42hc72bb7e_1
    - r-fs 1.5.2 r42h7525677_2
    - r-futile.logger 1.4.3 r42hc72bb7e_1004
    - r-futile.options 1.0.1 r42hc72bb7e_1003
    - r-generics 0.1.3 r42hc72bb7e_1
    - r-ggplot2 3.4.0 r42hc72bb7e_0
    - r-glue 1.6.2 r42h06615bd_1
    - r-gtable 0.3.1 r42hc72bb7e_1
    - r-isoband 0.2.6 r42h7525677_1
    - r-iterators 1.0.14 r42hc72bb7e_1
    - r-jsonlite 1.8.3 r42h06615bd_0
    - r-kernsmooth 2.23_20 r42hd009a43_1
    - r-labeling 0.4.2 r42hc72bb7e_2
    - r-lambda.r 1.2.4 r42hc72bb7e_2
    - r-lattice 0.20_45 r42h06615bd_1
    - r-lifecycle 1.0.3 r42hc72bb7e_1
    - r-magrittr 2.0.3 r42h06615bd_1
    - r-mass 7.3_58.1 r42h06615bd_1
    - r-matrix 1.5_1 r42h5f7b363_0
    - r-mgcv 1.8_41 r42h5f7b363_0
    - r-munsell 0.5.0 r42hc72bb7e_1005
    - r-nlme 3.1_160 r42h8da6f51_0
    - r-philentropy 0.7.0 r42h7525677_0
    - r-pillar 1.8.1 r42hc72bb7e_1
    - r-pkgconfig 2.0.3 r42hc72bb7e_2
    - r-pkgload 1.3.1 r42hc72bb7e_0
    - r-poorman 0.2.6 r42hc72bb7e_1
    - r-praise 1.0.0 r42hc72bb7e_1006
    - r-processx 3.8.0 r42h06615bd_0
    - r-ps 1.7.2 r42h06615bd_0
    - r-r6 2.5.1 r42hc72bb7e_1
    - r-rcolorbrewer 1.1_3 r42h785f33e_1
    - r-rcpp 1.0.9 r42h7525677_2
    - r-rcurl 1.98_1.9 r42h06615bd_1
    - r-rematch2 2.1.2 r42hc72bb7e_2
    - r-rlang 1.0.6 r42h7525677_1
    - r-rprojroot 2.0.3 r42hc72bb7e_1
    - r-scales 1.2.1 r42hc72bb7e_1
    - r-snow 0.4_4 r42hc72bb7e_1
    - r-testthat 3.1.5 r42h7525677_1
    - r-tibble 3.1.8 r42h06615bd_1
    - r-tidyselect 1.2.0 r42hc72bb7e_0
    - r-utf8 1.2.2 r42h06615bd_1
    - r-vctrs 0.5.0 r42h7525677_0
    - r-viridislite 0.4.1 r42hc72bb7e_1
    - r-waldo 0.4.0 r42hc72bb7e_1
    - r-withr 2.5.0 r42hc72bb7e_1
    - readline 8.1.2 h0f457ee_0
    - sed 4.8 he412f7d_0
    - setuptools 65.5.1 pyhd8ed1ab_0
    - sysroot_linux-64 2.12 he073ed8_15
    - tk 8.6.12 h27826a3_0
    - tktable 2.10 hb7b940f_3
    - toml 0.10.2 pyhd8ed1ab_0
    - tzdata 2022f h191b570_0
    - wheel 0.38.2 pyhd8ed1ab_0
    - xmltodict 0.13.0 pyhd8ed1ab_0
    - xorg-kbproto 1.0.7 h7f98852_1002
    - xorg-libice 1.0.10 h7f98852_0
    - xorg-libsm 1.2.3 hd9c2040_1000
    - xorg-libx11 1.7.2 h7f98852_0
    - xorg-libxau 1.0.9 h7f98852_0
    - xorg-libxdmcp 1.1.3 h7f98852_0
    - xorg-libxext 1.3.4 h7f98852_1
    - xorg-libxrender 0.9.10 h7f98852_1003
    - xorg-libxt 1.2.1 h7f98852_2
    - xorg-renderproto 0.11.1 h7f98852_1002
    - xorg-xextproto 7.3.0 h7f98852_1002
    - xorg-xproto 7.0.31 h7f98852_1007
    - xz 5.2.6 h166bdaf_0
    - yaml 0.2.5 h7f98852_2
    - yq 2.13.0 pyhd8ed1ab_0
    - zipp 3.10.0 pyhd8ed1ab_0
    - zlib 1.2.13 h166bdaf_4
    - zstd 1.5.2 h6239696_4
  run:
    - bioconductor-genomicranges
    - bioconductor-iranges
    - bioconductor-preprocesscore
    - bioconductor-rsamtools
    - r-base >=4.2,<4.3.0a0
    - r-doparallel
    - r-dplyr
    - r-foreach
    - r-ggplot2
    - r-magrittr
    - r-philentropy
    - r-tibble
test:
  commands:
    - $R -e "library('noisyr')"
about:
  home: https://github.com/Core-Bioinformatics/noisyR
  license: GPL-2.0-only
  license_family: GPL2
  license_file:
    - /opt/conda/conda-bld/r-noisyr_1667871236195/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/lib/R/share/licenses/GPL-2
  summary: Quantifies and removes technical noise from high-throughput sequencing
    data. Two approaches are used, one based on the count matrix, and one using the
    alignment BAM files directly. Contains several options for every step of the process,
    as well as tools to quality check and assess the stability of output.
extra:
  copy_test_source_files: true
  final: true
