# Visualize Genome Coverage with Various Annotations

## Documentation for package ‘ggcoverage’ version 0.7.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

FormatTrack | Prepare Input for Creating Coverage Plot.
geom_base | Add Base and Amino Acid Annotation to Coverage Plot.
geom_coverage | Layer for Coverage Plot.
geom_gc | Add GC Content Annotation to Coverage Plot.
geom_gene | Add Gene Annotation to Coverage Plot.
geom_ideogram | Add Ideogram Annotation to Coverage Plot.
geom_peak | Add Peak Annotation to Coverage Plot.
geom_transcript | Add Transcript Annotation to Coverage Plot.
ggcoverage | Create Coverage Plot.
LoadTrackFile | Load Track File to Dataframe.
theme_aa | Theme for geom_base with Amino Acid.
theme_base | Theme for geom_base.
theme_base2 | Theme for geom_base without margin.
theme_coverage | Theme for geom_coverage.
theme_coverage2 | Theme for geom_coverage.
theme_gc | Theme for geom_gc.
theme_gene | Theme for geom_gene.
theme_ideogram | Theme for geom_ideogram.
theme_peak | Theme for geom_peak.
theme_transcript | Theme for geom_transcript.