Package: DiMSum
Title: A pipeline for processing deep mutational scanning data
Version: 1.3
Authors@R: c(
    person("Andre", "Faure", email = "ajfaure@gmail.com", role = c("aut", "cre")),
    person("Joern", "Schmiedel", email = "joern.schmiedel@gmail.com", role = c("aut")))
Description: A pipeline for processing deep mutational scanning (DMS) data. 
Depends: R (>= 3.6)
Imports: cowplot, data.table, ggplot2, gridExtra, hexbin, optparse,
        parallel, plyr, reshape2, rmarkdown, seqinr, stringr,
        Biostrings, Cairo, GGally, IRanges, ShortRead
biocViews:
SystemRequirements: Cutadapt, FastQC, gunzip, Pandoc, Starcode, VSEARCH
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
Author: Andre Faure [aut, cre],
  Joern Schmiedel [aut]
Maintainer: Andre Faure <ajfaure@gmail.com>
Built: R 4.0.5; ; 2023-07-17 00:54:31 UTC; unix
