dimsum	dimsum
dimsum_stage_counts_to_fitness	dimsum_stage_counts_to_fitness
dimsum_stage_cutadapt	dimsum_stage_cutadapt
dimsum_stage_demultiplex	dimsum_stage_demultiplex
dimsum_stage_fastqc	dimsum_stage_fastqc
dimsum_stage_merge	dimsum_stage_merge
dimsum_stage_unique	dimsum_stage_unique
dimsum_stage_unzip	dimsum_stage_unzip
dimsum_stage_vsearch	dimsum_stage_vsearch
dimsum__aggregate_AA_variants	dimsum__aggregate_AA_variants
dimsum__aggregate_AA_variants_fitness	dimsum__aggregate_AA_variants_fitness
dimsum__bayesian_double_fitness	dimsum__bayesian_double_fitness
dimsum__calculate_fitness	dimsum__calculate_fitness
dimsum__cbind_fill	dimsum__cbind_fill
dimsum__check_barcodeidentityfile	dimsum__check_barcodeidentityfile
dimsum__check_barcode_design	dimsum__check_barcode_design
dimsum__check_countfile	dimsum__check_countfile
dimsum__check_experiment_design	dimsum__check_experiment_design
dimsum__check_experiment_design_countfile	dimsum__check_experiment_design_countfile
dimsum__check_files_exist	dimsum__check_files_exist
dimsum__check_variants	dimsum__check_variants
dimsum__concatenate_reads	dimsum__concatenate_reads
dimsum__convert_linked_adapters	dimsum__convert_linked_adapters
dimsum__create_dir	dimsum__create_dir
dimsum__cutadapt_report	dimsum__cutadapt_report
dimsum__debarcode_variants	dimsum__debarcode_variants
dimsum__demultiplex_cp_helper	dimsum__demultiplex_cp_helper
dimsum__demultiplex_helper	dimsum__demultiplex_helper
dimsum__derange_df	dimsum__derange_df
dimsum__detect_sequence_type	dimsum__detect_sequence_type
dimsum__diagnostics_report	dimsum__diagnostics_report
dimsum__error_model	dimsum__error_model
dimsum__error_model_qqplot	dimsum__error_model_qqplot
dimsum__fastqc_report	dimsum__fastqc_report
dimsum__filter_nuc_variants	dimsum__filter_nuc_variants
dimsum__filter_reads	dimsum__filter_reads
dimsum__filter_reads_helper	dimsum__filter_reads_helper
dimsum__filter_single_end_reads	dimsum__filter_single_end_reads
dimsum__filter_variants_coding	dimsum__filter_variants_coding
dimsum__filter_variants_noncoding	dimsum__filter_variants_noncoding
dimsum__fit_error_model	dimsum__fit_error_model
dimsum__fit_error_model_bootstrap	dimsum__fit_error_model_bootstrap
dimsum__get_barcode_design	dimsum__get_barcode_design
dimsum__get_cutadapt_options	dimsum__get_cutadapt_options
dimsum__get_experiment_design	dimsum__get_experiment_design
dimsum__get_synonymsequences	dimsum__get_synonymsequences
dimsum__ggpairs_binhex	dimsum__ggpairs_binhex
dimsum__gg_color_hue	dimsum__gg_color_hue
dimsum__hamming_distance	dimsum__hamming_distance
dimsum__identify_double_aa_mutations	dimsum__identify_double_aa_mutations
dimsum__identify_double_nt_mutations	dimsum__identify_double_nt_mutations
dimsum__identify_permitted_mutations	dimsum__identify_permitted_mutations
dimsum__identify_single_aa_mutations	dimsum__identify_single_aa_mutations
dimsum__identify_single_nt_mutations	dimsum__identify_single_nt_mutations
dimsum__identify_STOP_mutations	dimsum__identify_STOP_mutations
dimsum__infer_growth_rates	dimsum__infer_growth_rates
dimsum__merge_fitness	dimsum__merge_fitness
dimsum__merge_report	dimsum__merge_report
dimsum__normalise_fitness	dimsum__normalise_fitness
dimsum__parse_cutadapt_output	dimsum__parse_cutadapt_output
dimsum__parse_cutadapt_output_single_end	dimsum__parse_cutadapt_output_single_end
dimsum__parse_minimum_read_count_arguments	dimsum__parse_minimum_read_count_arguments
dimsum__plot_samplename	dimsum__plot_samplename
dimsum__process_merged_variants	dimsum__process_merged_variants
dimsum__range_df	dimsum__range_df
dimsum__remove_internal_constant_region	dimsum__remove_internal_constant_region
dimsum__render_report	dimsum__render_report
dimsum__replicate_fitness_deviation	dimsum__replicate_fitness_deviation
dimsum__sample_count_distributions	dimsum__sample_count_distributions
dimsum__save_metadata	dimsum__save_metadata
dimsum__save_png	dimsum__save_png
dimsum__status_message	dimsum__status_message
dimsum__sum_datatable_columns	dimsum__sum_datatable_columns
dimsum__swap_reads	dimsum__swap_reads
dimsum__unique_helper	dimsum__unique_helper
dimsum__unzip_helper	dimsum__unzip_helper
dimsum__validate_input	dimsum__validate_input
dimsum__vsearch_report	dimsum__vsearch_report
dimsum__vsearch_single_end_library_helper	dimsum__vsearch_single_end_library_helper
dimsum__vsearch_trans_library_helper	dimsum__vsearch_trans_library_helper
dimsum__writeFastq	dimsum__writeFastq
