Package: DESeqAnalysis
Title: Acid Genomics DESeq2 Analysis Utilities
Description: Toolkit for performing differential expression with DESeq2.
Version: 0.5.0
Date: 2022-04-15
Authors@R: c(
    person(
        given = "Michael",
        family = "Steinbaugh",
        email = "mike@steinbaugh.com",
        role = c("aut", "cre"),
        comment = c(ORCID = "0000-0002-2403-2221")
    ),
    person(
        given = "Acid Genomics",
        role = c("cph", "fnd")
    ))
URL: https://r.acidgenomics.com/packages/deseqanalysis/,
        https://github.com/acidgenomics/r-deseqanalysis/
BugReports: https://github.com/acidgenomics/r-deseqanalysis/issues/
License: AGPL-3
Encoding: UTF-8
LazyData: false
Depends: R (>= 4.1), DESeq2 (>= 1.34.0)
Imports: AcidBase (>= 0.5.0), AcidCLI (>= 0.2.0), AcidExperiment (>=
        0.3.0), AcidGenerics (>= 0.6.0), AcidGenomes (>= 0.3.0),
        AcidMarkdown (>= 0.1.6), AcidPlots (>= 0.4.0), AcidPlyr (>=
        0.2.0), BiocGenerics, IRanges, S4Vectors, SummarizedExperiment,
        ggplot2, goalie (>= 0.6.0), methods, pipette (>= 0.8.0), stats,
        stringr, syntactic (>= 0.5.1), utils
Suggests: apeglm, ashr, basejump (>= 0.15.0), knitr, testthat, tximport
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.2
Additional_repositories: https://r.acidgenomics.com
Author: Michael Steinbaugh [aut, cre] (<https://orcid.org/0000-0002-2403-2221>),
  Acid Genomics [cph, fnd]
Maintainer: Michael Steinbaugh <mike@steinbaugh.com>
Built: R 4.1.3; ; 2022-11-06 02:01:34 UTC; unix
