Package: DESeqAnalysis
Title: DESeq2 Analysis Utilities
Description: Toolkit for performing differential expression with DESeq2.
Version: 0.3.7
Date: 2020-09-18
Authors@R: c(
    person(
        given = "Michael",
        family = "Steinbaugh",
        email = "mike@steinbaugh.com",
        role = c("aut", "cre"),
        comment = c(ORCID = "0000-0002-2403-2221")
    ),
    person(
        given = "Acid Genomics",
        role = c("cph", "fnd")
    ))
URL: https://deseqanalysis.acidgenomics.com/,
        https://github.com/acidgenomics/DESeqAnalysis/
BugReports: https://github.com/acidgenomics/DESeqAnalysis/issues/
License: GPL-3
Encoding: UTF-8
LazyData: false
Depends: R (>= 4.0), basejump (>= 0.12.14), DESeq2 (>= 1.28)
Imports: BiocGenerics, IRanges, S4Vectors, SummarizedExperiment,
        acidgenerics (>= 0.3.11), acidplots (>= 0.2.35), cli (>= 2.0),
        cowplot (>= 1.0), ggplot2 (>= 3.3), goalie (>= 0.4.8), knitr,
        methods, rlang (>= 0.4), scales, stats, stringr (>= 1.4), utils
Suggests: BiocStyle, apeglm (>= 1.10), ashr (>= 2.2.47), roxygen2,
        testthat, tximport (>= 1.16), viridis
Remotes: acidgenomics/acidgenerics, acidgenomics/acidplots,
        acidgenomics/basejump, acidgenomics/goalie
biocViews: DataRepresentation, DifferentialExpression, GeneExpression,
        MultipleComparison, RNASeq, Transcription, Visualization
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.1
VignetteBuilder: knitr
Author: Michael Steinbaugh [aut, cre] (<https://orcid.org/0000-0002-2403-2221>),
  Acid Genomics [cph, fnd]
Maintainer: Michael Steinbaugh <mike@steinbaugh.com>
Built: R 4.0.2; ; 2020-09-18 21:26:11 UTC; unix
