Package: DESeqAnalysis
Title: DESeq2 Analysis Utilities
Description: Toolkit for performing differential expression with DESeq2.
Version: 0.2.5
Date: 2019-08-27
Authors@R: c(
    person(
        given = "Michael",
        family = "Steinbaugh",
        email = "mike@steinbaugh.com",
        role = c("aut", "cre"),
        comment = c(ORCID = "0000-0002-2403-2221")
    ),
    person(
        given = "Acid Genomics",
        role = c("cph", "fnd")
    ))
URL: https://deseqanalysis.acidgenomics.com/,
        https://github.com/acidgenomics/DESeqAnalysis/
BugReports: https://github.com/acidgenomics/DESeqAnalysis/issues/
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: false
Depends: R (>= 3.6), basejump (>= 0.11.11)
Imports: acidplots (>= 0.2.14), bioverbs (>= 0.2.7), goalie (>= 0.3.6),
        BiocGenerics (>= 0.30), DESeq2 (>= 1.24), IRanges (>= 2.18.2),
        S4Vectors (>= 0.22), SummarizedExperiment (>= 1.14), UpSetR (>=
        1.4), cowplot (>= 0.9), ggplot2 (>= 3.2), knitr (>= 1.24),
        rlang (>= 0.4), stringr (>= 1.4), methods, scales, utils
Suggests: acidroxygen (>= 0.1), BiocStyle (>= 2.12), roxygen2 (>= 6.1),
        patrick (>= 0.0.1), testthat (>= 2.2), viridis (>= 0.5)
Remotes: acidgenomics/acidplots, acidgenomics/acidroxygen,
        acidgenomics/basejump, acidgenomics/bioverbs,
        acidgenomics/goalie
biocViews: DataRepresentation, DifferentialExpression, GeneExpression,
        MultipleComparison, RNASeq, Transcription, Visualization
Roxygen: list(markdown = TRUE)
RoxygenNote: 6.1.1
VignetteBuilder: knitr
Author: Michael Steinbaugh [aut, cre] (<https://orcid.org/0000-0002-2403-2221>),
  Acid Genomics [cph, fnd]
Maintainer: Michael Steinbaugh <mike@steinbaugh.com>
Built: R 3.6.1; ; 2019-09-07 15:33:34 UTC; unix
