# This file created by conda-build 3.10.9
# meta.yaml template originally from:
# /opt/recipe, last modified Thu Jul  5 18:33:36 2018
# ------------------------------------------------

package:
    name: quast
    version: 4.6.3
source:
    md5: 177d3c5ad03ef13089aaf348e3250177
    patches:
        - add-gage-to-regular-install.patch
        - genemark-issue_disable-and-exclude-from-package.patch
        - gnuplot-issue_disable-mummer-plots.patch
    url: http://downloads.sourceforge.net/project/quast/quast-4.6.3.tar.gz
build:
    noarch: generic
    number: '2'
    string: py27pl526h3727419_2
requirements:
    build:
        - toolchain 2.1.6 0
        - toolchain_c_linux-64 2.1.6 0
    host:
        - backports 1.0 py27_1
        - backports.functools_lru_cache 1.5 py27_0
        - backports_abc 0.5 py27_0
        - blast 2.5.0 h3727419_3
        - boost 1.66.0 py27_1
        - boost-cpp 1.66.0 1
        - bzip2 1.0.6 1
        - ca-certificates 2018.4.16 0
        - certifi 2018.4.16 py27_0
        - cycler 0.10.0 py27_0
        - dbus 1.13.0 h3a4f0e9_0
        - expat 2.2.5 hfc679d8_1
        - fontconfig 2.12.6 0
        - freetype 2.8.1 0
        - functools32 3.2.3.2 py27_2
        - futures 3.2.0 py27_0
        - gettext 0.19.8.1 0
        - glib 2.55.0 0
        - gst-plugins-base 1.8.0 0
        - gstreamer 1.8.0 1
        - icu 58.2 hfc679d8_0
        - intel-openmp 2018.0.3 0
        - joblib 0.12 py_0
        - jpeg 9c h470a237_0
        - kiwisolver 1.0.1 py27_1
        - libffi 3.2.1 3
        - libgcc 7.2.0 h69d50b8_2
        - libgcc-ng 7.2.0 hdf63c60_3
        - libgfortran-ng 7.2.0 hdf63c60_3
        - libiconv 1.15 h470a237_1
        - libpng 1.6.34 ha92aebf_1
        - libstdcxx-ng 7.2.0 hdf63c60_3
        - libxcb 1.13 h470a237_0
        - libxml2 2.9.8 h422b904_1
        - matplotlib 2.2.2 py27_1
        - mkl 2018.0.3 1
        - mkl_fft 1.0.2 py27_0
        - mkl_random 1.0.1 py27_0
        - ncurses 5.9 10
        - numpy 1.14.2 py27hdbf6ddf_1
        - openjdk 8.0.144 zulu8.23.0.3_1
        - openssl 1.0.2o 0
        - pcre 8.41 1
        - perl 5.26.2 h14c3975_0
        - pip 9.0.3 py27_0
        - pyparsing 2.2.0 py27_0
        - pyqt 5.6.0 py27_5
        - python 2.7.15 0
        - python-dateutil 2.7.3 py_0
        - pytz 2018.5 py_0
        - qt 5.6.2 7
        - readline 7.0 0
        - setuptools 39.2.0 py27_0
        - simplejson 3.8.1 py27_0
        - singledispatch 3.4.0.3 py27_0
        - sip 4.18 py27_1
        - six 1.11.0 py27_1
        - sqlite 3.20.1 2
        - subprocess32 3.5.2 py27_0
        - tk 8.6.7 0
        - tornado 5.0.2 py27_0
        - wheel 0.31.0 py27_0
        - xorg-libxau 1.0.8 h470a237_4
        - xorg-libxdmcp 1.1.2 h470a237_4
        - xz 5.2.3 0
        - zlib 1.2.11 h470a237_3
    run:
        - blast
        - boost >=1.66.0,<1.66.1.0a0
        - joblib
        - libgcc-ng >=4.9
        - matplotlib
        - openjdk
        - perl >=5.26.2,<5.27.0a0
        - python
        - simplejson
test:
    commands:
        - quast --version
        - metaquast --version
    source_files:
        - test_data
about:
    home: https://sourceforge.net/projects/quast/
    license: Custom
    license_file: LICENSE.txt
    summary: Quality Assessment Tool for Genome Assemblies
extra:
    copy_test_source_files: true
    final: true
    identifiers:
        - biotools:quast
    notes: '- drawing MUMmer plots is disabled due to issues with gnuplot

        - GeneMark gene prediction software is disabled due to licensing issues

        '
