# hmmscan :: search sequence(s) against a profile database
# HMMER 3.0 (March 2010); http://hmmer.org/
# Copyright (C) 2010 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query sequence file:             seqs/all.faa
# target HMM database:             /tmp/pytest-of-hennings/pytest-0/test_full_analysis_and_file_pr0/test_dbs/foam/rel1a/processed/FOAM-hmm_rel1a.hmm.unzipped_hmmlib-3-0
# output directed to file:         tasks/fun_annot_by_hmmer-3-0_on_foam.vrel1a.task6.log
# per-seq hits tabular output:     tasks/fun_annot_by_hmmer-3-0_on_foam.vrel1a.task6.result
# show alignments in output:       no
# max ASCII text line length:      unlimited
# profile reporting threshold:     E-value <= 0.01
# number of worker threads:        3
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query:       WP_003131952.1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model:

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                           6  (1384 nodes)
Passed MSV filter:                         0  (0); expected 0.1 (0.02)
Passed bias filter:                        0  (0); expected 0.1 (0.02)
Passed Vit filter:                         0  (0); expected 0.0 (0.001)
Passed Fwd filter:                         0  (0); expected 0.0 (1e-05)
Initial search space (Z):                  6  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00
# Mc/sec: inf
//
Query:       NP_268346.1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model:

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                           6  (1384 nodes)
Passed MSV filter:                         0  (0); expected 0.1 (0.02)
Passed bias filter:                        0  (0); expected 0.1 (0.02)
Passed Vit filter:                         0  (0); expected 0.0 (0.001)
Passed Fwd filter:                         0  (0); expected 0.0 (1e-05)
Initial search space (Z):                  6  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00
# Mc/sec: inf
//
Query:       KZK33282.1  [L=81]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model:

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (81 residues)
Target model(s):                           6  (1384 nodes)
Passed MSV filter:                         0  (0); expected 0.1 (0.02)
Passed bias filter:                        0  (0); expected 0.1 (0.02)
Passed Vit filter:                         0  (0); expected 0.0 (0.001)
Passed Fwd filter:                         0  (0); expected 0.0 (1e-05)
Initial search space (Z):                  6  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00
# Mc/sec: inf
//
Query:       WP_000665196.1  [L=162]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model:

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (162 residues)
Target model(s):                           6  (1384 nodes)
Passed MSV filter:                         0  (0); expected 0.1 (0.02)
Passed bias filter:                        0  (0); expected 0.1 (0.02)
Passed Vit filter:                         0  (0); expected 0.0 (0.001)
Passed Fwd filter:                         0  (0); expected 0.0 (1e-05)
Initial search space (Z):                  6  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00
# Mc/sec: inf
//
Query:       PKC80086.1  [L=490]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model             Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    3.8e-07   18.7   0.0      7e-07   17.8   0.0    1.4  1  KO:K01744_4.3.1.1 KO:K01744 4.3.1.1


Domain annotation for each model:
>> KO:K01744_4.3.1.1  KO:K01744 4.3.1.1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.8   0.0   1.2e-07     7e-07     107     176 ..     114     183 ..     106     192 .. 0.88



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (490 residues)
Target model(s):                           6  (1384 nodes)
Passed MSV filter:                         1  (0.166667); expected 0.1 (0.02)
Passed bias filter:                        1  (0.166667); expected 0.1 (0.02)
Passed Vit filter:                         1  (0.166667); expected 0.0 (0.001)
Passed Fwd filter:                         1  (0.166667); expected 0.0 (1e-05)
Initial search space (Z):                  6  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00
# Mc/sec: inf
//
Query:       SUC62851.1  [L=393]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model              Description
    ------- ------ -----    ------- ------ -----   ---- --  --------           -----------
      8e-07   16.6   0.0    1.2e-06   16.0   0.0    1.2  1  KO:K07636_2.7.13.3 KO:K07636 2.7.13.3


Domain annotation for each model:
>> KO:K07636_2.7.13.3  KO:K07636 2.7.13.3
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   16.0   0.0     2e-07   1.2e-06     308     414 ..      13     121 ..      11     124 .. 0.78



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (393 residues)
Target model(s):                           6  (1384 nodes)
Passed MSV filter:                         1  (0.166667); expected 0.1 (0.02)
Passed bias filter:                        1  (0.166667); expected 0.1 (0.02)
Passed Vit filter:                         1  (0.166667); expected 0.0 (0.001)
Passed Fwd filter:                         1  (0.166667); expected 0.0 (1e-05)
Initial search space (Z):                  6  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00
# Mc/sec: inf
//
Query:       XP_963622.1  [L=494]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model:

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (494 residues)
Target model(s):                           6  (1384 nodes)
Passed MSV filter:                         0  (0); expected 0.1 (0.02)
Passed bias filter:                        0  (0); expected 0.1 (0.02)
Passed Vit filter:                         0  (0); expected 0.0 (0.001)
Passed Fwd filter:                         0  (0); expected 0.0 (1e-05)
Initial search space (Z):                  6  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00
# Mc/sec: inf
//
Query:       sp|Q197F8  [L=458]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model:

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (458 residues)
Target model(s):                           6  (1384 nodes)
Passed MSV filter:                         0  (0); expected 0.1 (0.02)
Passed bias filter:                        0  (0); expected 0.1 (0.02)
Passed Vit filter:                         0  (0); expected 0.0 (0.001)
Passed Fwd filter:                         0  (0); expected 0.0 (1e-05)
Initial search space (Z):                  6  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.01
# Mc/sec: 63.39
//
Query:       sp|Q6GZX0  [L=204]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model:

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (204 residues)
Target model(s):                           6  (1384 nodes)
Passed MSV filter:                         0  (0); expected 0.1 (0.02)
Passed bias filter:                        0  (0); expected 0.1 (0.02)
Passed Vit filter:                         0  (0); expected 0.0 (0.001)
Passed Fwd filter:                         0  (0); expected 0.0 (1e-05)
Initial search space (Z):                  6  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00
# Mc/sec: inf
//
Query:       sp|Q6GZV2  [L=382]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model:

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (382 residues)
Target model(s):                           6  (1384 nodes)
Passed MSV filter:                         0  (0); expected 0.1 (0.02)
Passed bias filter:                        0  (0); expected 0.1 (0.02)
Passed Vit filter:                         0  (0); expected 0.0 (0.001)
Passed Fwd filter:                         0  (0); expected 0.0 (1e-05)
Initial search space (Z):                  6  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00
# Mc/sec: inf
//
Query:       sp|Q6GZU4  [L=629]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model:

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (629 residues)
Target model(s):                           6  (1384 nodes)
Passed MSV filter:                         0  (0); expected 0.1 (0.02)
Passed bias filter:                        0  (0); expected 0.1 (0.02)
Passed Vit filter:                         0  (0); expected 0.0 (0.001)
Passed Fwd filter:                         0  (0); expected 0.0 (1e-05)
Initial search space (Z):                  6  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00
# Mc/sec: inf
//
Query:       tr|G8IHY6  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model                Description
    ------- ------ -----    ------- ------ -----   ---- --  --------             -----------
      3e-10   28.6  14.9    1.5e-09   26.3  10.3    1.9  1  KO:K10944_1.14.99.39 


Domain annotation for each model:
>> KO:K10944_1.14.99.39  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   26.3  10.3   2.5e-10   1.5e-09      24     168 ..      11     152 ..       4     211 .. 0.81



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                           6  (1384 nodes)
Passed MSV filter:                         2  (0.333333); expected 0.1 (0.02)
Passed bias filter:                        1  (0.166667); expected 0.1 (0.02)
Passed Vit filter:                         1  (0.166667); expected 0.0 (0.001)
Passed Fwd filter:                         1  (0.166667); expected 0.0 (1e-05)
Initial search space (Z):                  6  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.00u 0.01s 00:00:00.01 Elapsed: 00:00:00.00
# Mc/sec: inf
//
Query:       tr|A0A2S1TQ58  [L=212]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model                Description
    ------- ------ -----    ------- ------ -----   ---- --  --------             -----------
    6.9e-10   27.5  12.2    3.1e-09   25.3   8.4    1.8  1  KO:K10944_1.14.99.39 
    2.3e-09   26.0  11.9    1.2e-08   23.6   8.2    1.9  1  KO:K10944_1.14.99.39 


Domain annotation for each model:
>> KO:K10944_1.14.99.39  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.3   8.4     1e-09   3.1e-09      24     168 ..      11     152 ..       4     210 .. 0.79

>> KO:K10944_1.14.99.39  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.6   8.2   4.1e-09   1.2e-08      25     197 ..      12     170 ..       5     209 .. 0.74



Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (212 residues)
Target model(s):                           6  (1384 nodes)
Passed MSV filter:                         2  (0.333333); expected 0.1 (0.02)
Passed bias filter:                        2  (0.333333); expected 0.1 (0.02)
Passed Vit filter:                         2  (0.333333); expected 0.0 (0.001)
Passed Fwd filter:                         2  (0.333333); expected 0.0 (1e-05)
Initial search space (Z):                  6  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
# Mc/sec: 29.34
//
Query:       tr|A0A126QUZ5  [L=222]
Scores for complete sequence (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Model    Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each model:

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query sequence(s):                         1  (222 residues)
Target model(s):                           6  (1384 nodes)
Passed MSV filter:                         0  (0); expected 0.1 (0.02)
Passed bias filter:                        0  (0); expected 0.1 (0.02)
Passed Vit filter:                         0  (0); expected 0.0 (0.001)
Passed Fwd filter:                         0  (0); expected 0.0 (1e-05)
Initial search space (Z):                  6  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 0.00u 0.00s 00:00:00.00 Elapsed: 00:00:00.00
# Mc/sec: inf
//
