diamond v0.9.26.127 | by Benjamin Buchfink <buchfink@gmail.com>
Licensed under the GNU GPL <https://www.gnu.org/licenses/gpl.txt>
Check http://github.com/bbuchfink/diamond for updates.

#CPU threads: 3
Scoring parameters: (Matrix=BLOSUM62 Lambda=0.267 K=0.041 Penalties=11/1)
Temporary directory: tasks
Opening the database...  [1.5e-05s]
Percentage range of top alignment score to report hits: 0
Opening the input file...  [7e-06s]
Opening the output file...  [7e-06s]
Loading query sequences...  [2.6e-05s]
Masking queries...  [0.000241s]
Building query seed set...  [0.000768s]
Algorithm: Double-indexed
Building query histograms...  [0.000141s]
Allocating buffers...  [1.2e-05s]
Loading reference sequences...  [4.8e-05s]
Masking reference...  [0.001011s]
Building reference histograms...  [0.000363s]
Allocating buffers...  [1.4e-05s]
Initializing temporary storage...  [0.000103s]
Processing query chunk 0, reference chunk 0, shape 0, index chunk 0.
Building reference index...  [0.000601s]
Building query index...  [0.000333s]
Building seed filter...  [0.000247s]
Searching alignments...  [0.001026s]
Processing query chunk 0, reference chunk 0, shape 0, index chunk 1.
Building reference index...  [0.000448s]
Building query index...  [0.00029s]
Building seed filter...  [0.00021s]
Searching alignments...  [0.001216s]
Processing query chunk 0, reference chunk 0, shape 0, index chunk 2.
Building reference index...  [0.000552s]
Building query index...  [0.000216s]
Building seed filter...  [0.00012s]
Searching alignments...  [0.001544s]
Processing query chunk 0, reference chunk 0, shape 0, index chunk 3.
Building reference index...  [0.000497s]
Building query index...  [0.00032s]
Building seed filter...  [0.000257s]
Searching alignments...  [0.00134s]
Processing query chunk 0, reference chunk 0, shape 1, index chunk 0.
Building reference index...  [0.000383s]
Building query index...  [0.000277s]
Building seed filter...  [0.000267s]
Searching alignments...  [0.000861s]
Processing query chunk 0, reference chunk 0, shape 1, index chunk 1.
Building reference index...  [0.000404s]
Building query index...  [0.000288s]
Building seed filter...  [0.000219s]
Searching alignments...  [0.001063s]
Processing query chunk 0, reference chunk 0, shape 1, index chunk 2.
Building reference index...  [0.000438s]
Building query index...  [0.000274s]
Building seed filter...  [0.000211s]
Searching alignments...  [0.001226s]
Processing query chunk 0, reference chunk 0, shape 1, index chunk 3.
Building reference index...  [0.000402s]
Building query index...  [0.000216s]
Building seed filter...  [0.000146s]
Searching alignments...  [0.001055s]
Deallocating buffers...  [3e-06s]
Computing alignments...  [0.002818s]
Deallocating reference...  [1e-06s]
Loading reference sequences...  [6e-06s]
Deallocating buffers...  [3.8e-05s]
Deallocating queries...  [2e-06s]
Loading query sequences...  [5e-06s]
Closing the input file...  [3e-06s]
Closing the output file...  [8e-06s]
Closing the database file...  [2e-06s]
Deallocating taxonomy...  [1e-06s]
Total time = 0.023034s
Reported 3 pairwise alignments, 3 HSPs.
3 queries aligned.
