bin/pneumo-typer
share/pneumo-typer/DATABASE/._CPS_workplace
share/pneumo-typer/DATABASE/._gene.txt
share/pneumo-typer/DATABASE/._serotype_matrix.txt
share/pneumo-typer/DATABASE/CPS_workplace/._id_list
share/pneumo-typer/DATABASE/CPS_workplace/._seq_file.fasta
share/pneumo-typer/DATABASE/CPS_workplace/id_list
share/pneumo-typer/DATABASE/CPS_workplace/seq_file.fasta
share/pneumo-typer/DATABASE/gene.txt
share/pneumo-typer/DATABASE/serotype_matrix.txt
share/pneumo-typer/README.md
share/pneumo-typer/ST_tool/._ST_profile.pl
share/pneumo-typer/ST_tool/._ST_profile_cg.pl
share/pneumo-typer/ST_tool/._bacth_blast.pl
share/pneumo-typer/ST_tool/._bacth_blat.pl
share/pneumo-typer/ST_tool/._database
share/pneumo-typer/ST_tool/._gene_bacth_extract.pl
share/pneumo-typer/ST_tool/ST_profile.pl
share/pneumo-typer/ST_tool/ST_profile_cg.pl
share/pneumo-typer/ST_tool/bacth_blast.pl
share/pneumo-typer/ST_tool/bacth_blat.pl
share/pneumo-typer/ST_tool/database/._Time_readme.txt
share/pneumo-typer/ST_tool/database/._cgmlst
share/pneumo-typer/ST_tool/database/._core_genome.list
share/pneumo-typer/ST_tool/database/._mlst
share/pneumo-typer/ST_tool/database/._seven_gene.list
share/pneumo-typer/ST_tool/database/._web_site.pl
share/pneumo-typer/ST_tool/database/Time_readme.txt
share/pneumo-typer/ST_tool/database/cgmlst/._cgMLSA_loci
share/pneumo-typer/ST_tool/database/cgmlst/._cgMLSA_loci.name
share/pneumo-typer/ST_tool/database/cgmlst/._cgMLST_profiles
share/pneumo-typer/ST_tool/database/cgmlst/cgMLSA_loci.name
share/pneumo-typer/ST_tool/database/cgmlst/cgMLSA_loci/._SPNE00213.fas
share/pneumo-typer/ST_tool/database/cgmlst/cgMLSA_loci/._cgMLSA_loci.fas
share/pneumo-typer/ST_tool/database/cgmlst/cgMLSA_loci/SPNE00213.fas
share/pneumo-typer/ST_tool/database/cgmlst/cgMLSA_loci/cgMLSA_loci.fas
share/pneumo-typer/ST_tool/database/cgmlst/cgMLST_profiles
share/pneumo-typer/ST_tool/database/core_genome.list
share/pneumo-typer/ST_tool/database/mlst/._MLSA_senven_loci
share/pneumo-typer/ST_tool/database/mlst/._MLST_profiles
share/pneumo-typer/ST_tool/database/mlst/MLSA_senven_loci/._aroE.fas
share/pneumo-typer/ST_tool/database/mlst/MLSA_senven_loci/._ddl.fas
share/pneumo-typer/ST_tool/database/mlst/MLSA_senven_loci/._gdh.fas
share/pneumo-typer/ST_tool/database/mlst/MLSA_senven_loci/._gki.fas
share/pneumo-typer/ST_tool/database/mlst/MLSA_senven_loci/._recP.fas
share/pneumo-typer/ST_tool/database/mlst/MLSA_senven_loci/._spi.fas
share/pneumo-typer/ST_tool/database/mlst/MLSA_senven_loci/._xpt.fas
share/pneumo-typer/ST_tool/database/mlst/MLSA_senven_loci/aroE.fas
share/pneumo-typer/ST_tool/database/mlst/MLSA_senven_loci/ddl.fas
share/pneumo-typer/ST_tool/database/mlst/MLSA_senven_loci/gdh.fas
share/pneumo-typer/ST_tool/database/mlst/MLSA_senven_loci/gki.fas
share/pneumo-typer/ST_tool/database/mlst/MLSA_senven_loci/recP.fas
share/pneumo-typer/ST_tool/database/mlst/MLSA_senven_loci/spi.fas
share/pneumo-typer/ST_tool/database/mlst/MLSA_senven_loci/xpt.fas
share/pneumo-typer/ST_tool/database/mlst/MLST_profiles
share/pneumo-typer/ST_tool/database/seven_gene.list
share/pneumo-typer/ST_tool/database/web_site.pl
share/pneumo-typer/ST_tool/gene_bacth_extract.pl
share/pneumo-typer/ST_tool/lib/._Chi
share/pneumo-typer/ST_tool/lib/._Chi.pm
share/pneumo-typer/ST_tool/lib/Chi.pm
share/pneumo-typer/ST_tool/lib/Chi/._IPC
share/pneumo-typer/ST_tool/lib/Chi/._Link
share/pneumo-typer/ST_tool/lib/Chi/._Link.pm
share/pneumo-typer/ST_tool/lib/Chi/._Util.pm
share/pneumo-typer/ST_tool/lib/Chi/IPC/._Pipe.pm
share/pneumo-typer/ST_tool/lib/Chi/IPC/Pipe.pm
share/pneumo-typer/ST_tool/lib/Chi/Link.pm
share/pneumo-typer/ST_tool/lib/Chi/Link/._IPC
share/pneumo-typer/ST_tool/lib/Chi/Link/._IPC.pm
share/pneumo-typer/ST_tool/lib/Chi/Link/._Parent.pm
share/pneumo-typer/ST_tool/lib/Chi/Link/._Proc.pm
share/pneumo-typer/ST_tool/lib/Chi/Link/IPC.pm
share/pneumo-typer/ST_tool/lib/Chi/Link/IPC/._Pipe
share/pneumo-typer/ST_tool/lib/Chi/Link/IPC/._Pipe.pm
share/pneumo-typer/ST_tool/lib/Chi/Link/IPC/Pipe.pm
share/pneumo-typer/ST_tool/lib/Chi/Link/IPC/Pipe/._Parent.pm
share/pneumo-typer/ST_tool/lib/Chi/Link/IPC/Pipe/._Proc.pm
share/pneumo-typer/ST_tool/lib/Chi/Link/IPC/Pipe/Parent.pm
share/pneumo-typer/ST_tool/lib/Chi/Link/IPC/Pipe/Proc.pm
share/pneumo-typer/ST_tool/lib/Chi/Link/Parent.pm
share/pneumo-typer/ST_tool/lib/Chi/Link/Proc.pm
share/pneumo-typer/ST_tool/lib/Chi/Util.pm
share/pneumo-typer/ST_tool/lib/Para/._Runner.pm
share/pneumo-typer/ST_tool/lib/Para/Runner.pm
share/pneumo-typer/Test_data/._test1.fasta
share/pneumo-typer/Test_data/._test2.gbk
share/pneumo-typer/Test_data/test1.fasta
share/pneumo-typer/Test_data/test2.gbk
share/pneumo-typer/build_env_setup.sh
share/pneumo-typer/conda_build.sh
share/pneumo-typer/lib/._Chi
share/pneumo-typer/lib/._Chi.pm
share/pneumo-typer/lib/._PTyper.pm
share/pneumo-typer/lib/Chi.pm
share/pneumo-typer/lib/Chi/._IPC
share/pneumo-typer/lib/Chi/._Link
share/pneumo-typer/lib/Chi/._Link.pm
share/pneumo-typer/lib/Chi/._Util.pm
share/pneumo-typer/lib/Chi/IPC/._Pipe.pm
share/pneumo-typer/lib/Chi/IPC/Pipe.pm
share/pneumo-typer/lib/Chi/Link.pm
share/pneumo-typer/lib/Chi/Link/._IPC
share/pneumo-typer/lib/Chi/Link/._IPC.pm
share/pneumo-typer/lib/Chi/Link/._Parent.pm
share/pneumo-typer/lib/Chi/Link/._Proc.pm
share/pneumo-typer/lib/Chi/Link/IPC.pm
share/pneumo-typer/lib/Chi/Link/IPC/._Pipe
share/pneumo-typer/lib/Chi/Link/IPC/._Pipe.pm
share/pneumo-typer/lib/Chi/Link/IPC/Pipe.pm
share/pneumo-typer/lib/Chi/Link/IPC/Pipe/._Parent.pm
share/pneumo-typer/lib/Chi/Link/IPC/Pipe/._Proc.pm
share/pneumo-typer/lib/Chi/Link/IPC/Pipe/Parent.pm
share/pneumo-typer/lib/Chi/Link/IPC/Pipe/Proc.pm
share/pneumo-typer/lib/Chi/Link/Parent.pm
share/pneumo-typer/lib/Chi/Link/Proc.pm
share/pneumo-typer/lib/Chi/Util.pm
share/pneumo-typer/lib/PTyper.pm
share/pneumo-typer/lib/Para/._Runner.pm
share/pneumo-typer/lib/Para/Runner.pm
share/pneumo-typer/metadata_conda_debug.yaml
share/pneumo-typer/pneumo-typer.pl
share/pneumo-typer/recipes/._build.sh
share/pneumo-typer/recipes/._meta.yaml
share/pneumo-typer/recipes/build.sh
share/pneumo-typer/recipes/meta.yaml
share/pneumo-typer/script/._color_configure
share/pneumo-typer/script/._cps_cluster.pl
share/pneumo-typer/script/._font_configure
share/pneumo-typer/script/._heatmap.pl
share/pneumo-typer/script/._interested_gene.pl
share/pneumo-typer/script/._lib
share/pneumo-typer/script/._mcr.pl
share/pneumo-typer/script/._ser_join_ST.pl
share/pneumo-typer/script/._serotype_correct.pl
share/pneumo-typer/script/color_configure/._colors_configure_file
share/pneumo-typer/script/color_configure/colors_configure_file
share/pneumo-typer/script/cps_cluster.pl
share/pneumo-typer/script/font_configure/._6x10.bdf.fnt
share/pneumo-typer/script/font_configure/._6x10.bdf.ttf
share/pneumo-typer/script/font_configure/6x10.bdf.fnt
share/pneumo-typer/script/font_configure/6x10.bdf.ttf
share/pneumo-typer/script/heatmap.pl
share/pneumo-typer/script/interested_gene.pl
share/pneumo-typer/script/lib/._OrthoMCL_analysis.pm
share/pneumo-typer/script/lib/._PNG_image.pm
share/pneumo-typer/script/lib/._SVG_heatmap.pm
share/pneumo-typer/script/lib/._SVG_image.pm
share/pneumo-typer/script/lib/._font_rotate.pm
share/pneumo-typer/script/lib/._metrics.pm
share/pneumo-typer/script/lib/._process.pm
share/pneumo-typer/script/lib/OrthoMCL_analysis.pm
share/pneumo-typer/script/lib/PNG_image.pm
share/pneumo-typer/script/lib/SVG_heatmap.pm
share/pneumo-typer/script/lib/SVG_image.pm
share/pneumo-typer/script/lib/font_rotate.pm
share/pneumo-typer/script/lib/metrics.pm
share/pneumo-typer/script/lib/process.pm
share/pneumo-typer/script/mcr.pl
share/pneumo-typer/script/ser_join_ST.pl
share/pneumo-typer/script/serotype_correct.pl
