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python-scripts/plastedma.py
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python-scripts/snakemake_util.py
python-scripts/t_coffee_run.py
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share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/60-65/273.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/60-65/28.fasta
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share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/60-65/88.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/60-65/9.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/60-65/91.fasta
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share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/60-65/95.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/60-65/98.fasta
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share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/102.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/103.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/109.fasta
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share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/114.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/115.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/12.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/125.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/13.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/19.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/20.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/21.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/22.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/23.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/24.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/25.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/26.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/27.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/28.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/29.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/3.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/30.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/33.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/34.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/43.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/45.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/48.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/50.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/51.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/52.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/53.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/56.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/6.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/66.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/7.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/70.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/72.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/76.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/81.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/86.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/9.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/65-70/99.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/70-75/10.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/70-75/11.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/70-75/12.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/70-75/13.fasta
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share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/70-75/18.fasta
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share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/70-75/27.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/70-75/29.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/70-75/3.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/70-75/31.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/70-75/4.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/70-75/5.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/70-75/51.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/70-75/6.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/70-75/7.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/70-75/8.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/70-75/9.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/1.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/10.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/11.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/12.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/15.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/16.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/18.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/2.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/20.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/21.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/24.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/3.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/32.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/35.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/37.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/4.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/40.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/45.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/49.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/5.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/54.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/7.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/8.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/75-80/9.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/1.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/10.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/11.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/12.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/13.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/15.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/16.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/22.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/23.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/24.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/26.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/27.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/28.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/29.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/3.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/30.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/32.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/34.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/4.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/41.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/44.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/80-85/8.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/85-90/1.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/85-90/10.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/85-90/3.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/CDHIT/85-90/5.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/DLH/A0A1H6AD45_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/DLH/A0A1S8DKK6_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/DLH/A0A2D6THA8_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/DLH/A0A2E2HR50_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/DLH/A0A2E8C7L9_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/DLH/A0A6N3TCR0_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/DLH/A0A6N3U899_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/DLH/A0A6N3UBQ8_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/DLH/UPI0013BE8ADA_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/LCC/A0A2H5Z9R5_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/LCC/A0A7C2WC81_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/LCC/G9BY57_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/LCC/UPI0002AA2420_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/LCC/UPI0018FE02A5_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/MNP1/A0A8G0KG87_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/MNP1/A7U4R0_PHACH_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/MNP1/Q02567_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/MNP1/UPI000011268C_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/60-65.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/65-70.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/70-75.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/75-80.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/80-85.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/85-90.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/cd-hit90_after_diamond_60-65.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/cd-hit90_after_diamond_60-65.fasta.clstr
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/cd-hit90_after_diamond_65-70.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/cd-hit90_after_diamond_65-70.fasta.clstr
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/cd-hit90_after_diamond_70-75.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/cd-hit90_after_diamond_70-75.fasta.clstr
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/cd-hit90_after_diamond_75-80.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/cd-hit90_after_diamond_75-80.fasta.clstr
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/cd-hit90_after_diamond_80-85.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/cd-hit90_after_diamond_80-85.fasta.clstr
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/cd-hit90_after_diamond_85-90.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/UPIMAPI/cd-hit90_after_diamond_85-90.fasta.clstr
share/plastedma-0.1.2-0/resources/Data/FASTA/literature_seq/A0A1H6AD45_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/literature_seq/G9BY57_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/literature_seq/O22443_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/literature_seq/Q02567_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/literature_seq/Q9HTK9_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/literature_seq/lit_sequences.dmnd
share/plastedma-0.1.2-0/resources/Data/FASTA/literature_seq/lit_sequences.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/rubredoxin/A0A448BUT9_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/rubredoxin/A0A8I0NPH9_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/rubredoxin/Q9HTK9_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/rubredoxin/UPI00023200FE_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/rubredoxin/UPI000EAC9AAD_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/rubredoxin/UPI000EAF2B51_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/rubredoxin/UPI000EB0DCAA_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/rubredoxin/UPI0013CE0DF1_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/rubredoxin/UPI00141A9D30_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/soybean/A0A0B2QNE5_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/soybean/C6TGW5_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/soybean/O22443_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/soybean/UPI0000111665_AA.fasta
share/plastedma-0.1.2-0/resources/Data/FASTA/soybean/UPI00103B5438_AA.fasta
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/1.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/10.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/100.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/101.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/102.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/103.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/104.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/105.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/106.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/107.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/108.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/109.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/11.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/111.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/113.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/114.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/115.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/117.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/119.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/12.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/121.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/122.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/124.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/126.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/127.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/128.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/129.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/13.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/130.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/133.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/134.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/136.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/137.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/139.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/141.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/142.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/144.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/145.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/147.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/148.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/151.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/152.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/153.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/154.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/155.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/156.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/157.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/159.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/16.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/160.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/162.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/163.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/164.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/166.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/167.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/169.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/173.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/174.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/175.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/176.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/182.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/184.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/185.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/186.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/189.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/19.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/191.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/193.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/194.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/195.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/196.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/20.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/206.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/207.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/208.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/209.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/21.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/212.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/221.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/222.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/223.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/224.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/228.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/23.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/230.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/231.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/232.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/240.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/243.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/25.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/259.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/26.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/262.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/267.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/272.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/273.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/28.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/29.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/30.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/31.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/33.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/36.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/39.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/42.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/43.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/44.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/45.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/46.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/47.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/49.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/50.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/53.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/54.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/56.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/59.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/60.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/61.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/62.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/63.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/64.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/65.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/66.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/68.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/69.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/7.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/70.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/73.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/74.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/76.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/77.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/79.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/80.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/81.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/82.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/83.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/85.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/88.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/9.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/91.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/93.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/94.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/95.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/98.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/60-65/99.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/1.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/10.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/102.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/103.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/109.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/11.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/111.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/114.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/115.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/12.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/125.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/13.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/14.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/15.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/18.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/19.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/20.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/21.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/22.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/23.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/24.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/25.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/26.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/27.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/28.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/29.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/3.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/30.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/31.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/32.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/33.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/34.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/35.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/36.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/39.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/42.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/43.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/45.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/46.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/48.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/50.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/51.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/52.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/53.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/56.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/57.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/59.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/6.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/60.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/61.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/62.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/64.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/66.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/7.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/70.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/72.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/75.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/76.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/81.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/86.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/88.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/9.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/94.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/96.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/97.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/65-70/99.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/10.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/11.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/12.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/13.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/14.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/15.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/16.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/17.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/18.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/19.hmm
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share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/26.hmm
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share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/29.hmm
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share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/31.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/32.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/35.hmm
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share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/39.hmm
share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/4.hmm
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share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/44.hmm
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share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/70-75/53.hmm
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share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/75-80/38.hmm
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share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/75-80/60.hmm
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share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/75-80/79.hmm
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share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/80-85/15.hmm
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share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/80-85/25.hmm
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share/plastedma-0.1.2-0/resources/Data/HMMs/After_tcoffee_UPI/80-85/34.hmm
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share/plastedma-0.1.2-0/scripts/t_coffee_run.py
