name: {{ tool_name }}
## TODO nf-core: Add a description of the module and list keywords
description: write your description here
keywords:
  - sort
tools:
  - {{ tool }}:
      ## TODO nf-core: Add a description and other details for the software below
      description: {{ tool_description }}
      homepage: {{ tool_doc_url }}
      documentation: {{ tool_doc_url }}
      tool_dev_url: {{ tool_dev_url }}
      doi: ""
      licence: {{ tool_licence }}

## TODO nf-core: Add a description of all of the variables used as input
input:
  {% if has_meta -%}
  - meta:
      type: map
      description: |
        Groovy Map containing sample information
        e.g. [ id:'test', single_end:false ]
  {% endif -%}
  ## TODO nf-core: Delete / customise this example input
  - bam:
      type: file
      description: BAM/CRAM/SAM file
      pattern: "*.{bam,cram,sam}"

## TODO nf-core: Add a description of all of the variables used as output
output:
  {% if has_meta -%}
  - meta:
      type: map
      description: |
        Groovy Map containing sample information
        e.g. [ id:'test', single_end:false ]
  {% endif -%}
  - version:
      type: file
      description: File containing software version
      pattern: "*.{version.txt}"
  ## TODO nf-core: Delete / customise this example output
  - bam:
      type: file
      description: Sorted BAM/CRAM/SAM file
      pattern: "*.{bam,cram,sam}"

authors:
  - "{{ author }}"
