{
  "assemblies": [
    {
      "name": "ref",
      "sequence": {
        "type": "ReferenceSequenceTrack",
        "trackId": "ref-ReferenceSequenceTrack",
        "adapter": {
          "type": "IndexedFastaAdapter",
          "fastaLocation": {
            "uri": "ref.fa",
            "locationType": "UriLocation"
          },
          "faiLocation": {
            "uri": "ref.fa.fai",
            "locationType": "UriLocation"
          },
          "metadataLocation": {
            "uri": "https://raw.githubusercontent.com/FFRGS/FFRGS-Specification/main/examples/example.yaml",
            "locationType": "UriLocation"
          }
        }
      }
    }
  ],
  "configuration": {},
  "connections": [],
  "defaultSession": {
    "name": "New Session"
  },
  "tracks": [
    {
      "type": "AlignmentsTrack",
      "trackId": "bwa-meth.sorted.subselect.downsample",
      "name": "bwa-meth.sorted.subselect.downsample",
      "assemblyNames": ["ref"],
      "adapter": {
        "type": "BamAdapter",
        "bamLocation": {
          "uri": "bwa-meth.sorted.subselect.downsample.bam",
          "locationType": "UriLocation"
        },
        "index": {
          "location": {
            "uri": "bwa-meth.sorted.subselect.downsample.bam.bai",
            "locationType": "UriLocation"
          },
          "indexType": "BAI"
        },
        "sequenceAdapter": {
          "type": "IndexedFastaAdapter",
          "fastaLocation": {
            "uri": "ref.fa",
            "locationType": "UriLocation"
          },
          "faiLocation": {
            "uri": "ref.fa.fai",
            "locationType": "UriLocation"
          }
        }
      }
    }
  ]
}
