# This file created by conda-build 3.24.0
# meta.yaml template originally from:
# /opt/recipe, last modified Wed Feb  7 11:11:33 2024
# ------------------------------------------------

package:
  name: htsinfer
  version: 0.11.0
source:
  sha256: f7225290e12bf129bdb654f06f1cb98da577be81d35f7d17844447fcdf058618
  url: https://github.com/zavolanlab/htsinfer/archive/refs/tags/v0.11.0.tar.gz
build:
  entry_points:
    - htsinfer = htsinfer.cli:main
  noarch: python
  number: '0'
  run_exports:
    - htsinfer >=0.11.0,<0.12.0a0
  script: /opt/conda/conda-bld/htsinfer_1707304696302/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/bin/python
    -m pip install . --no-deps --no-build-isolation -vvv
  string: pyhdfd78af_0
requirements:
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - biopython 1.83 py310h2372a71_0
    - bzip2 1.0.8 hd590300_5
    - c-ares 1.26.0 hd590300_0
    - ca-certificates 2024.2.2 hbcca054_0
    - keyutils 1.6.1 h166bdaf_0
    - krb5 1.21.2 h659d440_0
    - ld_impl_linux-64 2.40 h41732ed_0
    - libblas 3.9.0 21_linux64_openblas
    - libcblas 3.9.0 21_linux64_openblas
    - libcurl 8.5.0 hca28451_0
    - libdeflate 1.18 h0b41bf4_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 hd590300_2
    - libffi 3.4.2 h7f98852_5
    - libgcc-ng 13.2.0 h807b86a_5
    - libgfortran-ng 13.2.0 h69a702a_5
    - libgfortran5 13.2.0 ha4646dd_5
    - libgomp 13.2.0 h807b86a_5
    - liblapack 3.9.0 21_linux64_openblas
    - libnghttp2 1.58.0 h47da74e_1
    - libnsl 2.0.1 hd590300_0
    - libopenblas 0.3.26 pthreads_h413a1c8_0
    - libsqlite 3.44.2 h2797004_0
    - libssh2 1.11.0 h0841786_0
    - libstdcxx-ng 13.2.0 h7e041cc_5
    - libuuid 2.38.1 h0b41bf4_0
    - libzlib 1.2.13 hd590300_5
    - ncurses 6.4 h59595ed_2
    - numpy 1.24.4 py310ha4c1d20_0
    - openssl 3.2.1 hd590300_0
    - pandas 1.3.5 py310hb5077e9_0
    - pip 24.0 pyhd8ed1ab_0
    - pyahocorasick 2.0.0 py310h2372a71_1
    - pydantic 1.10.13 py310h2372a71_1
    - pysam 0.22.0 py310h41dec4a_0
    - python 3.10.0 h543edf9_3_cpython
    - python-dateutil 2.8.2 pyhd8ed1ab_0
    - python_abi 3.10 4_cp310
    - pytz 2024.1 pyhd8ed1ab_0
    - readline 8.2 h8228510_1
    - setuptools 59.8.0 py310hff52083_1
    - setuptools-git 1.2 py_1
    - six 1.16.0 pyh6c4a22f_0
    - sqlite 3.44.2 h2c6b66d_0
    - tk 8.6.13 noxft_h4845f30_101
    - typing-extensions 4.9.0 hd8ed1ab_0
    - typing_extensions 4.9.0 pyha770c72_0
    - tzdata 2024a h0c530f3_0
    - wheel 0.42.0 pyhd8ed1ab_0
    - xz 5.2.6 h166bdaf_0
    - zlib 1.2.13 hd590300_5
    - zstd 1.5.5 hfc55251_0
  run:
    - biopython >=1.78
    - cutadapt >=3.5, <=4.2
    - kallisto >=0.46.1, <= 0.48.0
    - numpy >=1.22, <1.25
    - pandas >=1.3.5, <1.4.0
    - pyahocorasick >=1.4.0
    - pydantic >=1.8.1, <2
    - pysam >=0.16.0
    - python >=3.8, <=3.10
    - star >=2.7.6
test:
  commands:
    - htsinfer --version
about:
  home: https://github.com/zavolanlab/htsinfer
  license: Apache-2.0
  license_family: APACHE
  license_file: LICENSE
  summary: HTSinfer infers metadata from Illumina high throughput sequencing (HTS)
    data
extra:
  copy_test_source_files: true
  final: true
  recipe-maintainers:
    - balajtimate
