Package: CHORD
Type: Package
Title: Classifier of Homologous Recombination Deficiency
Version: 2.1.0
Author: Luan N. Nguyen
Maintainer: Luan N. Nguyen <l.nguyen@hartwigmedicalfoundation.nl>
Description: CHORD is a random forest model that uses the relative counts of somatic mutation contexts to predict
	homologous recombination deficiency (HRD). The primary contexts used by CHORD are deletions with
	flanking microhomology and 1-100kb structural duplications. Additionally, 1-100kb structural
	duplications are used to distinguish BRCA1-type HRD from BRCA2-type HRD.
License: MIT
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.0
biocViews:
Remotes: github::UMCUGenetics/mutSigExtractor
Imports: mutSigExtractor, randomForest
Built: R 4.3.3; ; 2024-10-09 02:12:40 UTC; unix
