{
  "V": 3,
  "train_genes": [
    "CD5",
    "CD45",
    "THY1",
    "H2-K",
    "CD28",
    "CD43",
    "CD33",
    "CD13",
    "CD15",
    "CCDC101",
    "MED12",
    "TADA2B",
    "TADA1",
    "HPRT1",
    "CUL3",
    "NF1",
    "NF2"
  ],
  "test_genes": [
    "CD5",
    "CD45",
    "THY1",
    "H2-K",
    "CD28",
    "CD43",
    "CD33",
    "CD13",
    "CD15",
    "CCDC101",
    "MED12",
    "TADA2B",
    "TADA1",
    "HPRT1",
    "CUL3",
    "NF1",
    "NF2"
  ],
  "testing_non_binary_target_name": "ranks",
  "include_pi_nuc_feat": true,
  "gc_features": true,
  "nuc_features": true,
  "include_gene_position": false,
  "include_NGGX_interaction": true,
  "include_Tm": true,
  "include_strand": false,
  "include_gene_feature": false,
  "include_gene_guide_feature": 0,
  "extra pairs": false,
  "weighted": null,
  "training_metric": "spearmanr",
  "NDGC_k": 10,
  "cv": "gene",
  "include_gene_effect": false,
  "include_drug": false,
  "include_sgRNAscore": false,
  "adaboost_loss": "ls",
  "adaboost_alpha": 0.5,
  "normalize_features": false,
  "adaboost_CV": false,
  "num_proc": 6,
  "num_thread_per_proc": null,
  "order": 2,
  "all pairs": false,
  "include_known_pairs": false,
  "seed": 1,
  "flipV1target": false,
  "num_genes_remove_train": null,
  "include_microhomology": false,
  "algorithm_hyperparam_search": "grid",
  "binary target name": "score_drug_gene_threshold",
  "rank-transformed target name": "score_drug_gene_rank",
  "raw target name": null,
  "all_genes": [
    "CD5",
    "CD45",
    "THY1",
    "H2-K",
    "CD28",
    "CD43",
    "CD33",
    "CD13",
    "CD15",
    "CCDC101",
    "MED12",
    "TADA2B",
    "TADA1",
    "HPRT1",
    "CUL3",
    "NF1",
    "NF2"
  ]
}