# This file created by conda-build 3.21.8
# meta.yaml template originally from:
# /opt/recipe, last modified Tue Feb 14 22:50:16 2023
# ------------------------------------------------

package:
  name: gtdbtk
  version: 2.2.2
source:
  sha256: f01d1defaa9e83d21859c780eaf3cc6b614508129434860a5271b1254f0fa7a0
  url: https://pypi.io/packages/source/g/gtdbtk/gtdbtk-2.2.2.tar.gz
build:
  entry_points:
    - gtdbtk = gtdbtk.__main__:main
  noarch: python
  number: '0'
  string: pyhdfd78af_0
requirements:
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - bzip2 1.0.8 h7f98852_4
    - ca-certificates 2022.12.7 ha878542_0
    - ld_impl_linux-64 2.40 h41732ed_0
    - libffi 3.4.2 h7f98852_5
    - libgcc-ng 12.2.0 h65d4601_19
    - libgomp 12.2.0 h65d4601_19
    - libnsl 2.0.0 h7f98852_0
    - libsqlite 3.40.0 h753d276_0
    - libuuid 2.32.1 h7f98852_1000
    - libzlib 1.2.13 h166bdaf_4
    - ncurses 6.3 h27087fc_1
    - openssl 3.0.8 h0b41bf4_0
    - pip 23.0 pyhd8ed1ab_0
    - python 3.11.0 he550d4f_1_cpython
    - readline 8.1.2 h0f457ee_0
    - setuptools 67.3.1 pyhd8ed1ab_0
    - tk 8.6.12 h27826a3_0
    - tzdata 2022g h191b570_0
    - wheel 0.38.4 pyhd8ed1ab_0
    - xz 5.2.6 h166bdaf_0
  run:
    - dendropy >=4.1.0
    - fastani ==1.3
    - fasttree >=2.1.9
    - hmmer ==3.1b2
    - mash >=2.0
    - numpy >=1.9.0
    - pplacer >=1.1.alpha17
    - prodigal >=2.6.2
    - pydantic
    - python >=3.6
    - tqdm >=4.35.0
test:
  imports:
    - gtdbtk
    - gtdbtk.biolib_lite
    - gtdbtk.config
    - gtdbtk.external
    - gtdbtk.external.pypfam
    - gtdbtk.external.pypfam.HMM
    - gtdbtk.external.pypfam.Scan
    - gtdbtk.files.marker
    - gtdbtk.files.prodigal
about:
  home: https://github.com/Ecogenomics/GTDBTk
  license: GNU General Public v3 (GPLv3)
  license_family: GPL3
  license_file: LICENSE
  summary: A toolkit for assigning objective taxonomic classifications to bacterial
    and archaeal genomes.
extra:
  copy_test_source_files: true
  final: true
  identifiers:
    - doi:10.1093/bioinformatics/btz848
  recipe-maintainers:
    - aaronmussig
    - pchaumeil
