This file is generated by test_nbt3102.py and is intended to confirm
this statement in the GOATOOLS manuscript:

        We observed: 
            93 genes associated with RNA, 
            47 genes associated with translation, 
            38 genes associated with mitochondrial, and 
            37 genes associated with ribosomal, as reported by GOATOOLS.


RNA: 93 study genes, 6 GOs
RNA GOs: GO:0006364, GO:0003723, GO:0003729, GO:0008097, GO:0019843, GO:0044822
0) BP GO:0006364 rRNA processing (8 genes)
1) MF GO:0003723 RNA binding (32 genes)
2) MF GO:0003729 mRNA binding (11 genes)
3) MF GO:0008097 5S rRNA binding (4 genes)
4) MF GO:0019843 rRNA binding (6 genes)
5) MF GO:0044822 poly(A) RNA binding (86 genes)
93 study genes:
  Ahnak, Aldoa, Anxa2, Arf1, Atp5a1, Auh, Btf3, Calr, Canx, Coro1a
  Csde1, Edf1, Eef1a1, Eef2, Eif3h, Eif4e2, Eif5a, Eno1, Fcf1, Fdps
  Gdi2, Gltscr2, Gm5506, Gnb2l1, H2-D1, H2-K1, H2-Q10, H2-Q7, Hdlbp, Hnrnpl
  Hsp90ab1, Hspa8, Immt, Lgals1, Mdh2, Mrpl45, Ndufv3, Npm1, P4hb, Pabpc1
  Park7, Pdia3, Pfn1, Pkm, Poldip3, Psma6, R3hdm1, Rbm39, Rbm5, Rpl13
  Rpl13a, Rpl14, Rpl18, Rpl18a, Rpl23, Rpl24, Rpl34, Rpl4, Rpl6, Rpl7
  Rpl7a, Rpl8, Rplp0, Rps10, Rps11, Rps14, Rps15, Rps15a, Rps17, Rps19
  Rps2, Rps20, Rps24, Rps25, Rps26, Rps3, Rps4x, Rps5, Rps7, Rps9
  Rpsa, Samhd1, Slc25a5, Son, Sptbn1, Srp72, Srpk1, Sub1, Suclg1, Sumo1
  Syf2, Ywhae, Zc3hav1

translation: 51 study genes, 7 GOs
translation GOs: GO:0006412, GO:0006414, GO:0006417, GO:0006614, GO:0017148, GO:0003746, GO:0031369
0) BP GO:0006412 translation (41 genes)
1) BP GO:0006414 translational elongation (7 genes)
2) BP GO:0006417 regulation of translation (9 genes)
3) BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane (3 genes)
4) BP GO:0017148 negative regulation of translation (6 genes)
5) MF GO:0003746 translation elongation factor activity (5 genes)
6) MF GO:0031369 translation initiation factor binding (4 genes)
51 study genes:
  Calr, Eef1a1, Eef1b2, Eef1g, Eef2, Eif2s3y, Eif3h, Eif3i, Eif4e2, Eif4ebp1
  Eif5a, Gnb2l1, Poldip3, Ppp1ca, Rpl13, Rpl13a, Rpl14, Rpl18, Rpl18a, Rpl23
  Rpl24, Rpl32, Rpl34, Rpl4, Rpl6, Rpl7, Rpl8, Rplp1, Rplp2, Rps11
  Rps14, Rps15, Rps17, Rps19, Rps2, Rps20, Rps24, Rps3, Rps3a1, Rps4x
  Rps5, Rps7, Rps9, Rpsa, Sars, Sec61a1, Slc25a4, Slc25a5, Srp72, Ssr3
  Ucp2

mitochondrial: 41 study genes, 10 GOs
mitochondrial GOs: GO:0008637, GO:0046902, GO:0051560, GO:0051881, GO:0000275, GO:0005743, GO:0005747, GO:0005753, GO:0005758, GO:0031966
0) BP GO:0008637 apoptotic mitochondrial changes (4 genes)
1) BP GO:0046902 regulation of mitochondrial membrane permeability (3 genes)
2) BP GO:0051560 mitochondrial calcium ion homeostasis (3 genes)
3) BP GO:0051881 regulation of mitochondrial membrane potential (7 genes)
4) CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) (3 genes)
5) CC GO:0005743 mitochondrial inner membrane (28 genes)
6) CC GO:0005747 mitochondrial respiratory chain complex I (5 genes)
7) CC GO:0005753 mitochondrial proton-transporting ATP synthase complex (4 genes)
8) CC GO:0005758 mitochondrial intermembrane space (7 genes)
9) CC GO:0031966 mitochondrial membrane (6 genes)
41 study genes:
  1500032L24Rik, Ak2, Anxa6, Atp5a1, Atp5b, Atp5d, Atp5f1, Bcl2, Bnip3, Chchd3
  Clic1, Cox4i1, Cox6a1, Cox7a2l, Csde1, Higd1a, Hk2, Immt, Map3k1, Mdh2
  Ndufb11, Ndufb7, Ndufv2, Ndufv3, Park7, Pdia3, Prelid1, Prelid2, Rps3, Sdhb
  Slc25a4, Slc25a5, Sod1, Stat3, Suclg1, Tmbim6, Ubb, Ucp2, Uqcrc1, Uqcrq
  Vdac1

mitochondrion: 68 study genes, 1 GOs
mitochondrion GOs: GO:0005739
0) CC GO:0005739 mitochondrion (68 genes)
68 study genes:
  1500032L24Rik, 1600014C10Rik, Aco2, Ak2, Aldoa, Aldoc, Ap2m1, Atp5a1, Atp5b, Atp5d
  Atp5f1, Auh, Bcl2, Bnip3, Bnip3l, Bsg, Chchd3, Clic1, Cox4i1, Cox6a1
  Cox7a2l, Ctsb, Cyba, Dpysl2, Ech1, Fam162a, Fdps, Fth1, Gimap5, Gnb2l1
  Gpx1, Gsk3b, Hemk1, Higd1a, Hk1, Hk2, Hsp90ab1, Immt, Ldha, Mdh2
  Mrpl45, Ndufb11, Ndufb7, Ndufv2, Ndufv3, Park7, Pdia3, Pkm, Prelid1, Prelid2
  Rpl34, Rps14, Rps15a, Rps3, Sars, Sdhb, Slc25a4, Slc25a5, Sod1, Sri
  Stat3, Suclg1, Ubb, Ucp2, Uqcrc1, Uqcrq, Vdac1, Ywhae

ribosomal: 37 study genes, 6 GOs
ribosomal GOs: GO:0000028, GO:0042274, GO:0015934, GO:0015935, GO:0022625, GO:0022627
0) BP GO:0000028 ribosomal small subunit assembly (9 genes)
1) BP GO:0042274 ribosomal small subunit biogenesis (6 genes)
2) CC GO:0015934 large ribosomal subunit (4 genes)
3) CC GO:0015935 small ribosomal subunit (13 genes)
4) CC GO:0022625 cytosolic large ribosomal subunit (16 genes)
5) CC GO:0022627 cytosolic small ribosomal subunit (19 genes)
37 study genes:
  Gnb2l1, Npm1, Rpl13, Rpl13a, Rpl14, Rpl18, Rpl18a, Rpl23, Rpl24, Rpl32
  Rpl34, Rpl4, Rpl6, Rpl7, Rpl7a, Rpl8, Rplp0, Rplp2, Rps10, Rps11
  Rps14, Rps15, Rps15a, Rps17, Rps19, Rps2, Rps20, Rps24, Rps25, Rps26
  Rps3, Rps3a1, Rps4x, Rps5, Rps7, Rps9, Rpsa

ribosome: 41 study genes, 2 GOs
ribosome GOs: GO:0005840, GO:0003735
0) CC GO:0005840 ribosome (35 genes)
1) MF GO:0003735 structural constituent of ribosome (38 genes)
41 study genes:
  Canx, Mrpl45, Rpl13, Rpl13a, Rpl14, Rpl18, Rpl18a, Rpl23, Rpl24, Rpl32
  Rpl34, Rpl4, Rpl6, Rpl7, Rpl7a, Rpl8, Rplp0, Rplp1, Rplp2, Rps10
  Rps11, Rps14, Rps15, Rps15a, Rps17, Rps19, Rps2, Rps20, Rps24, Rps25
  Rps26, Rps3, Rps3a1, Rps4x, Rps5, Rps7, Rps9, Rpsa, Slc25a4, Slc25a5
  Ucp2

adhesion: 53 study genes, 1 GOs
adhesion GOs: GO:0005925
0) CC GO:0005925 focal adhesion (53 genes)
53 study genes:
  Actb, Actr2, Actr3, Ahnak, Anxa6, Arf1, Arpc1b, Arpc2, Arpc5, B2m
  Bsg, Calr, Cap1, Ccnd3, Cd81, Cfl1, Gdi2, Gna13, Hspa8, Lcp1
  Msn, Npm1, P4hb, Pabpc1, Pdia3, Pfn1, Ptprc, Rac2, Rpl13a, Rpl18
  Rpl23, Rpl4, Rpl6, Rpl7, Rpl7a, Rpl8, Rplp0, Rplp2, Rps10, Rps11
  Rps14, Rps15, Rps17, Rps19, Rps2, Rps3, Rps5, Rps7, Rps9, Sdc4
  Tln1, Vim, Ywhae

endoplasmic: 49 study genes, 3 GOs
endoplasmic GOs: GO:0005783, GO:0005790, GO:0070971
0) CC GO:0005783 endoplasmic reticulum (48 genes)
1) CC GO:0005790 smooth endoplasmic reticulum (5 genes)
2) CC GO:0070971 endoplasmic reticulum exit site (4 genes)
49 study genes:
  0610007P14Rik, 1600014C10Rik, Bcl2, Bnip3, Bnip3l, Calr, Canx, Cst3, Ctsz, Dad1
  Ddost, Eef1b2, Eef1g, Eif5a, Ergic3, Gimap1, H2-D1, H2-K1, H2-Q10, H2-Q7
  Il24, Krtcap2, Npc2, P4hb, Park7, Pdia3, Pdia6, S100a10, Sar1b, Scd2
  Sec11a, Sec22b, Sec61a1, Selk, Sema4f, Shisa5, Soat1, Sri, Srp72, Srpk1
  Ssr2, Ssr3, Stt3b, Surf4, Tg, Tgfbr3, Tmbim6, Tmem50a, Vmp1

nucleotide: 46 study genes, 1 GOs
nucleotide GOs: GO:0000166
0) MF GO:0000166 nucleotide binding (46 genes)
46 study genes:
  Actb, Actg1, Actr2, Actr3, Ak2, Arf1, Atp2b4, Atp5a1, Atp5b, Bub1b
  Camk2d, Camk4, Cdc42, Cdk6, Csnk1d, Eef1a1, Eef2, Eif2s3y, Galk1, Gimap1
  Gimap4, Gimap5, Gna13, Gsk3b, Hk1, Hk2, Hnrnpl, Hsp90ab1, Hspa8, Jak3
  Kif20b, Map3k1, Pabpc1, Pfkp, Pkm, Poldip3, Rac2, Rbm39, Rbm5, Rps24
  Sar1b, Sars, Srpk1, Suclg1, Ube2d3, Vdac1

apoptotic: 48 study genes, 4 GOs
apoptotic GOs: GO:0006915, GO:0008637, GO:0043066, GO:0043154
0) BP GO:0006915 apoptotic process (26 genes)
1) BP GO:0008637 apoptotic mitochondrial changes (4 genes)
2) BP GO:0043066 negative regulation of apoptotic process (28 genes)
3) BP GO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process (6 genes)
48 study genes:
  Aldoc, Bcl2, Birc5, Bnip3, Bnip3l, Bub1b, Cdkn1a, Cdkn2d, Cyfip2, D17Wsu104e
  Dad1, Ddb1, Eif5a, Fam162a, Gadd45g, Glo1, Gnb2l1, Gpi1, Gpx1, Gsk3b
  Higd1a, Hk1, Hk2, Hsp90ab1, Igbp1, Il24, Il2rb, Lgals1, Map3k1, Mif
  Ncoa3, Npm1, Park7, Pdcd10, Prelid1, Rbm5, Rps3, Shisa5, Slc25a4, Sod1
  Son, Srgn, Stat3, Tmbim6, Tnfrsf18, Ube2d3, Ucp2, Vdac1

myelin: 31 study genes, 1 GOs
myelin GOs: GO:0043209
0) CC GO:0043209 myelin sheath (31 genes)
31 study genes:
  Aco2, Actb, Actg1, Atp5a1, Atp5b, Atp5f1, Bcl2, Canx, Cdc42, Cox6a1
  Dpysl2, Eef1a1, Gdi2, Gnb1, Gpi1, Hspa8, Immt, Mdh2, Mif, Msn
  Napa, Ndufv2, Pdia3, Pkm, Slc25a4, Slc25a5, Sod1, Ubb, Uqcrc1, Vdac1
  Wdr1
