 FGENESH 2.6 Prediction of potential genes in LODEDO genomic DNA
 Time    :   Tue May 11 09:25:29 2010
 Seq name: ladeda.Contig1 
 Length of sequence: 188015 
 Number of predicted genes 17: in +chain 8, in -chain 9.
 Number of predicted exons 53: in +chain 25, in -chain 28.
 Positions of predicted genes and exons: Variant   1 from   1, Score:368.648132 
   G Str   Feature   Start        End    Score           ORF           Len

   1 -      PolA       579               -4.26
   1 -    1 CDSo       963 -      1856   14.33       963 -      1856    894
   1 -      TSS       2636               -6.38

   2 -      PolA     36231                0.44
   2 -    1 CDSl     37032 -     38334   49.30     37032 -     38333   1302
   2 -    2 CDSf     38824 -     39209   11.78     38826 -     39209    384
   2 -      TSS      39286              -13.68

   3 +      TSS      39334               -7.68
   3 +    1 CDSf     39905 -     40366   27.68     39905 -     40366    462
   3 +    2 CDSi     40431 -     40943   46.45     40431 -     40943    513
   3 +    3 CDSl     41126 -     42013   77.89     41126 -     42013    888
   3 +      PolA     42106               -1.06

   4 -      PolA     42158               -4.26
   4 -    1 CDSl     42256 -     42839   14.59     42256 -     42837    582
   4 -    2 CDSf     43953 -     44292   23.20     43954 -     44292    339
   4 -      TSS      45339               -0.88

   5 -      PolA     45607               -4.26
   5 -    1 CDSl     45680 -     46075   14.92     45680 -     46075    396
   5 -    2 CDSi     46455 -     46825    3.78     46455 -     46823    369
   5 -    3 CDSi     47027 -     47061    1.49     47028 -     47060     33
   5 -    4 CDSi     47106 -     47145   -0.99     47108 -     47143     36
   5 -    5 CDSf     48123 -     48126   -2.35     48124 -     48126      3
   5 -      TSS      49797               -1.28

   6 +      TSS      53100               -4.38
   6 +    1 CDSf     53436 -     53471   -3.32     53436 -     53471     36
   6 +    2 CDSi     54236 -     54322    3.73     54236 -     54322     87
   6 +    3 CDSi     54655 -     54744    2.48     54655 -     54744     90
   6 +    4 CDSi     54933 -     55052    5.72     54933 -     55052    120
   6 +    5 CDSl     55576 -     55899   13.06     55576 -     55899    324
   6 +      PolA     56566               -2.36

   7 -      PolA     57685                0.44
   7 -    1 CDSl     58261 -     58650   21.85     58261 -     58650    390
   7 -    2 CDSi     58847 -     59044    1.83     58847 -     59044    198
   7 -    3 CDSi     59075 -     59428   28.72     59075 -     59428    354
   7 -    4 CDSi     59513 -     59794    4.30     59513 -     59794    282
   7 -    5 CDSf     59906 -     59983   -0.52     59906 -     59983     78
   7 -      TSS      60302               -3.98

   8 -      PolA    128796                0.44
   8 -    1 CDSl    129437 -    129712    7.70    129437 -    129712    276
   8 -    2 CDSi    130373 -    130442    8.73    130373 -    130441     69
   8 -    3 CDSf    130942 -    131015    2.24    130944 -    131015     72
   8 -      TSS     131542               -3.08

   9 +      TSS     132079              -13.28
   9 +    1 CDSo    132119 -    132409   14.73    132119 -    132409    291
   9 +      PolA    132701                0.44

  10 +      TSS     140570               -9.18
  10 +    1 CDSf    140744 -    141052   15.59    140744 -    141052    309
  10 +    2 CDSi    141830 -    141940   15.96    141830 -    141940    111
  10 +    3 CDSi    142142 -    142585   13.47    142142 -    142585    444
  10 +    4 CDSl    142804 -    142893    0.28    142804 -    142893     90
  10 +      PolA    143006               -6.46

  11 -      PolA    144872                0.44
  11 -    1 CDSl    145574 -    145594    0.76    145574 -    145594     21
  11 -    2 CDSf    146360 -    146689   18.22    146360 -    146689    330
  11 -      TSS     147218               -4.48

  12 +      TSS     149056               -2.08
  12 +    1 CDSo    149769 -    150050   10.06    149769 -    150050    282
  12 +      PolA    150103               -1.06

  13 -      PolA    150940               -4.96
  13 -    1 CDSl    151496 -    152054   24.37    151496 -    152053    558
  13 -    2 CDSf    152363 -    152862   27.87    152365 -    152862    498
  13 -      TSS     153289              -10.68

  14 +      TSS     153374               -8.68
  14 +    1 CDSo    154200 -    154622   20.98    154200 -    154622    423
  14 +      PolA    155088               -1.06

  15 +      TSS     157841               -7.08
  15 +    1 CDSf    158354 -    158359    1.80    158354 -    158359      6
  15 +    2 CDSi    158684 -    158713    7.50    158684 -    158713     30
  15 +    3 CDSi    162207 -    162290    6.01    162207 -    162290     84
  15 +    4 CDSi    162930 -    163013    7.52    162930 -    163013     84
  15 +    5 CDSi    163718 -    163807    4.08    163718 -    163807     90
  15 +    6 CDSi    163898 -    163930    8.37    163898 -    163930     33
  15 +    7 CDSi    164180 -    164218    1.85    164180 -    164218     39
  15 +    8 CDSl    164378 -    164449   -2.68    164378 -    164449     72
  15 +      PolA    165825                0.44

  16 -      PolA    169935               -1.06
  16 -    1 CDSl    169966 -    170088   -2.42    169966 -    170088    123
  16 -    2 CDSi    170166 -    170248    8.64    170166 -    170246     81
  16 -    3 CDSi    170407 -    170437   -2.28    170408 -    170437     30
  16 -    4 CDSi    170690 -    170731   10.76    170690 -    170731     42
  16 -    5 CDSi    171271 -    171370    2.04    171271 -    171369     99
  16 -    6 CDSf    171712 -    171752    0.11    171714 -    171752     39
  16 -      TSS     172148               -8.68

  17 +      TSS     175360               -2.48
  17 +    1 CDSf    176072 -    176255    6.13    176072 -    176254    183
  17 +    2 CDSl    177768 -    177949    5.20    177770 -    177949    180
  17 +      PolA    178220               -1.06

Predicted protein(s):
>FGENESH:   1   1 exon (s)    963  -   1856   297 aa, chain -
MTSITGRLRPDSYGSRTPPTTSITGRLRPDSYGSRTSPPTPIAGRLRPDSYGSRTSSPTL
AAGRPRPDSYGSQTSSPTPAAGKPRPDSYGSQTPLMTSITGRLHPDSYGSRTPPTTSITG
RLHPDSYGSRTSPPTPIASRLRPDSYGSRTSSPTPTAGRPRPDSYRSRTSSPTLAAGRPR
PDSYGSQTPLMTSIIGRLRPDSYGSRTPPTTSITGRLRLDSYGSRTSPPTPIAGRLCPDS
YGSQTSSPTSTAGRLRPDSYGSRTSSSCCKQPTPSYCCKQTTSSSYHDRPWSRLLNK
>FGENESH:   2   2 exon (s)  37032  -  39209   562 aa, chain -
MPPGTNKSDQEGERWPGRRGQEAPGRTPKEPRTEPLSEGVRPESTNMEWRPVRKPGEALP
RTRVRPQKQGPGGSKQKNSQNLRGRKNRKTFWGENLKGPRKANRGGNETPKVNSEEDTKE
MKRREAPRRRTGVGYKIPTAETLNGIDINCSSARTPTGAGLHRRQQVQLHPDSYGSRAPP
STSTAAPPGLLRESGSTADSKCSSARTPTGAGLHRRQQVQLRPDSYGSRAPPSTSTAAPP
GLLREPGSTADSKCSSARTPTRAGLHRRHQLQLRPDSYGSRAPPPIASAAPPRTPTGAGL
HRRQQVQLRPDSYGSRAPPPTASAAPPGLLREPGSTADINCSSARTPTGAGLHRRQQVQL
RPDSYGSRAPPPTATAAPPGLLWEQGSTADSNCSSARTPTGAGLHRRQQVQLRPDSYWGA
GLHRRQQVQLRPDSYGSRTSPLTFGCSTAPPGLLREPFSTLNINRNAAPPGLLWGAGLRL
RHPITAQLRSGSYGSRATSSTPTTAAASRLRPNSHESQAPPPTSAPRGVPPRTPPEVRLH
PRPCSTSCGGLRAVPSFPDRPQ
>FGENESH:   3   3 exon (s)  39905  -  42013   620 aa, chain +
MDAEATRMLAKAMRAQKRKGAMTSGSTKRARVEETSLAAPVQATLAIDIPSDAEPAAPRA
PSRSPPTGVPIPEVRPTEAPAAGRRRKSVARRASSHRATADESVCSEGGSENPFNDKALI
RRLLDGCILSDVVERIDCADPEQRAWDTLGSFLEIGHQLFAYVEASGRMRRDLLRAEERC
QDEVARLQAKTAEVAALREALERERQDREEERQAREDERRSLEESARKAEAEVAHLAEQT
PVLVSEARTLAVEEFKASAEMRELNVQFGLEAFTKGFELCRERVASRYPDLDLGFLEESD
DEAAPSSTAIAVAPPAPSSPPPAPECPTEALPLPLGVPLKSTIQRLKKEVLHLTKKLKKS
EGELCQAKKCYSEAAAEAAHFRSLQAKAIMDYSRRKANFTKELEECTKSASDRTWAQEAR
ISTLKVELSAAKRRIGQLEGNSSRTLARVDDEQKWSQKVSDLQKQLQDAEMSHDVQRASW
RRQVEEYKGRFRQAADEVVRLQRQLFTRAQLANAQDTEELLALRGTVEGISVSLGEKTAE
LQQVKIQLGLERKAVADAEAESEVLRKWHREAEAESRRLRQVLQDMLRKKEELEETVESL
RQSWLRDGGGNPRSEDVGPP
>FGENESH:   4   2 exon (s)  42256  -  44292   307 aa, chain -
MSHQFVAHFVSSRRPRKGSESLINIKQREGESIRAYVNCFNIAALEVRNLDQSVAMAALK
GGLQKNDLLYSLEKKYPRDFADLLARAEGYARAEEAFKMKDEETARERQAGDSTKWKVRT
PMGAGFRRQVRLRPDSYGSRVPPPRKTSPGLLREPGPAAKKDFARTPTGAGSRRQGRLHP
DSYGSRVPPPRKTSPGLLRELGSAAKKDFARTPTGAGFRRQGRLRSDSYGSRVPPPRKTS
LGLLWELGSAAKEDFARTPTGAGFRRQEGLHPDSYGSRVPSSRKTSPGPLREPGSNHHFC
SKGQRWW
>FGENESH:   5   5 exon (s)  45680  -  48126   281 aa, chain -
MGLDNDFRAMMRSCHRWNIESEINDIDLRSLLGIKYPQPKPSTESTSTAAPPGLLREPGS
TADSKCSSAQTPTGAGLHPRRQLQLRSDSYGSRAPLPTASAAPPGLLRESGSTTDSKCSS
ARTPTGAGLHPRHQLQLRPDSYGSRDPPPTHSSARTPTGVVLRPQHQPQRSSARTPKGAG
LRLRHQLQHSSARTPTGVGLCLRQQHSSDRALKGAGLRPRRQRLQPQADFARTPTRAELR
PQRQLRGGSARTPPEVGLHPRPYSTSCGGLRTVPSFPDRPQ
>FGENESH:   6   5 exon (s)  53436  -  55899   218 aa, chain +
MVDRLPDPNRAPLHHSLTSHDKSHHPAPLSATDFMQLHHSLVPVAAAVIPTLASPTSMEF
YTNRIGARGRAVPPPPATVVVAEQFDLLVQQVRGLTEVVQAIQQQQQPQASMSHQFAAHF
VSSQRLRRGSKYLINIKQREGKSIQAYVNHFNVAALEVRNLDQSIAMAALKGGLQKNDLL
FTLKKKYPKDFADLLARTEGYARAEKAFKMKDEETMRE
>FGENESH:   7   5 exon (s)  58261  -  59983   433 aa, chain -
MDASMARRLAQGLKTHKRKDPSTLGSSPPTEGPILEVRPEGAPGAEGRRRKKTLAQRSHS
RRAAAEGASGSEEDLGKNSFNNRDLIKRLVKGCILPEVVERIVLTDPELWVWDSLGSFLE
IGHQLITNVEVAKIAKKEAARAEEGRLAGAARLEEKIVEVLSLQEVLEKEGQTSSDLRIA
LEEEREKAEAEVSALRAQVSELEEQVFELKVWILSLVSEARARAVEEFKASPEMEDLKGF
ELCQEKVAGRFSELDLSFLDDAFDDEAGPSKVAAGPLPARTSSTAVATADDLSGTPTPST
STPECPVEALPLSESIPLKSMIQDLQRKVRQLTRKSKKLEDELHRLKESHSKATAEAIRF
RDLHKKSFMEYTKRKANFITELEELWKRANDQSWTQASKISSLKVELAAAREKIDRLEGS
SSRLTVQTDHDQD
>FGENESH:   8   3 exon (s) 129437  - 131015   139 aa, chain -
MDFSVENSFEEDKERWSMTKDEVLRSSVLPLVPSITELSPLLLKHQAKIQNLMVAVQAVQ
TVLTPSSVVPQPTQTAPAIPSSSVTNTIDSASAPPTVASLSNPTFQLPPQSEQPWVLSQS
PERRQTHQSHLKIWEPGRR
>FGENESH:   9   1 exon (s) 132119  - 132409    96 aa, chain +
MGRTLEMSPKKRKMMASIRVGNASMKADKMIRDHADPEHLLAIKERGLRPDAINLNLYLE
DSITMLHSNTPPSPYIDRNTAPRRSTEVKEDDSSTS
>FGENESH:  10   4 exon (s) 140744  - 142893   317 aa, chain +
MESNEPKIISNGVRMIEIRPIEVGMKSGATEDRRRLAVGRRWCGRARLRCGSAQPRLDSV
RPDGRAWPSMQARPRPERTRVRVRPRPTCTRVGARIARSIVDQARMKDVLIQQGLIDALL
CEEKPTTIEVQDWRWLQMQTKILTDLLSIGKNVEKNIRALVLLASLPPSYESLVTALLVG
MSIIKIDEVTTVILQNEILRRENSASSSGGSSSALMIFEGAGGGRRSNRRSRRGQSKSRR
DLSKTKCYQCDKLEHLARDCFQLRDRTMAIVATASSDSEKNILEISDKAGSYLTEQTGFE
RLQDGSWWKNSEDAMRR
>FGENESH:  11   2 exon (s) 145574  - 146689   116 aa, chain -
MVVGGGHSRDVVRSSVWEGRWSAVEKKEQEGSTVVGGGQPTTEKMKEQGGNAVLAKKKKE
QRGSAIMGRGATRAPRGTSIGGGCRREGNEDCRIGRHEHGGKTTIGRWAAVDDDGG
>FGENESH:  12   1 exon (s) 149769  - 150050    93 aa, chain +
MTRGTLEVMYKLLCQQNAVDDGPSINKGILHWTDQARHDRLQMADQDPSTHLVKSGAEID
WSKVARKQRIRPFWDESDRSLLLAHQNAPALKN
>FGENESH:  13   2 exon (s) 151496  - 152862   352 aa, chain -
MDCGRAAAGVETLAVGLPSGGRDDQHGIGVDPTIAVICGVLGGNGDPGGVHPIGVLSSID
DCTVKMRRLGFARMAMKIELSRPLRSDVLVQGPDGPYWQQYVFENLERVCLRCGFFHQLE
EGCWAGGCSRVAAAGLDPKHVVWAEELDGRKGEDGLCLRPWLLALQCGLQVAGSSQPKHP
QPSELDVGRVPIKPSKRNLGLVGPKKGSSKKTMAEGKGLASSMPSRVEIDGTGEFEIFLF
FAKALEVVGETTSMTGRGAQEPVVPDRVGMSIQTIEQCSKDDIWENIVGGGLRHPDGGVD
LSHEDAVAKLRQTIQKEGVSMESLDPMVDGIGGGAHDGVGSSEGPPSVGPSP
>FGENESH:  14   1 exon (s) 154200  - 154622   140 aa, chain +
MSYPLEQQQQQQPPPPPPMYEVVSKSSGGGSYGPVIGVIAVIAVLGVIAGIVGRLCSGRR
IFGYGYDFEGWIERKCASCIDGRVELRPPPPPVASPAAVPGANGGGGSATAAPPVGTRPE
GKQAERLARNPPPPAAAAET
>FGENESH:  15   8 exon (s) 158354  - 164449   145 aa, chain +
MEGGKVFNPFGKVRRSIQFFLDKLLSQTPDQQQTFSTISEMRSPIQFVLDNLLSQTPDQQ
QTFSAIREDHQNLVKTCSFIEEGITNITGMTIKWKEGMNIANHNGHEKKGVWCMNRPFCY
RNFREAWGMKMGIFKIIRRIFPNPI
>FGENESH:  16   6 exon (s) 169966  - 171752   139 aa, chain -
MTANLRIFLLLERRILHDESEDLDETLLSKSTEQTSAQPEPTQLEVMDNINFEDCIDEQV
TRRSEANKVNKRLSGVDVYDKFYQNKSGKFVIEEMRQHHEKILQLREQTTREVGSNSDTG
SQLVCSMTDDAILDAVFRR
>FGENESH:  17   2 exon (s) 176072  - 177949   121 aa, chain +
MAVEAKAKRWRRWHDDGGDLQLDFERERESYLRDRGPMEVKERRWQRQRQRRRWIDDDSG
RGNDKMCHERIMLNIIKGSKHFKDLRTLNGIDYPSFKKACYALGLLDDEKEYIDRIAEAS
Y
 FGENESH 2.6 Prediction of potential genes in LODEDO genomic DNA
 Time    :   Tue May 11 09:25:29 2010
 Seq name: ladeda.Contig2 
 Length of sequence: 69560 
 Number of predicted genes 3: in +chain 0, in -chain 3.
 Number of predicted exons 17: in +chain 0, in -chain 17.
 Positions of predicted genes and exons: Variant   1 from   1, Score:103.559631 
   G Str   Feature   Start        End    Score           ORF           Len

   1 -      PolA     23114                0.44
   1 -    1 CDSl     23145 -     23152   -2.70     23145 -     23150      6
   1 -    2 CDSi     23285 -     23369    5.50     23286 -     23369     84
   1 -    3 CDSi     24015 -     24095    4.68     24015 -     24095     81
   1 -    4 CDSi     24403 -     25013   28.88     24403 -     25011    609
   1 -    5 CDSi     26956 -     27055    2.41     26957 -     27055     99
   1 -    6 CDSi     27263 -     27361    4.00     27263 -     27361     99
   1 -    7 CDSi     29550 -     29900    9.06     29550 -     29900    351
   1 -    8 CDSi     30616 -     31017   24.12     30616 -     31017    402
   1 -    9 CDSi     31210 -     31517   19.49     31210 -     31515    306
   1 -   10 CDSf     31729 -     31969   13.92     31730 -     31969    240
   1 -      TSS      33569               -2.88

   2 -      PolA     54438                0.44
   2 -    1 CDSl     55059 -     55170    0.56     55059 -     55169    111
   2 -    2 CDSi     55398 -     55529   10.34     55400 -     55528    129
   2 -    3 CDSi     56405 -     56532    7.99     56407 -     56532    126
   2 -    4 CDSi     56587 -     56591    4.40     56587 -     56589      3
   2 -    5 CDSi     56766 -     56808    3.66     56767 -     56808     42
   2 -    6 CDSf     57054 -     57263    2.94     57054 -     57263    210
   2 -      TSS      57722               -6.58

   3 -      PolA     63240                0.44
   3 -    1 CDSo     63518 -     63826   13.20     63518 -     63826    309
   3 -      TSS      64018               -4.28

Predicted protein(s):
>FGENESH:   1  10 exon (s)  23145  -  31969   761 aa, chain -
MGSNMKVDFEKFDGKKNFSMWKIWVEDLLVQADLDQALDEKPEGMTDRQWVSLEKKACLV
IGGCLADAALYSVLEEKTPKGSYDSLVTTLLYGKETLEYEDMVSVLRSNEQREKLTRDRA
PQEGLAVGERTGRGRGRSKSRGRSKSKKGKKEVKCFKCNEFGNLKRECPLWKSKKGERSG
SESVVGIGTVRVRMFDGIVRILTNVKHIPKLEKNLMSLGYLERSEYSFNSRARSGVLNIS
NRAMVVMRGRRLDNNLYRMEGSVVTGESDAAAVAQDQQGAYRIWHYCLGHMGDKGLRELS
RRGLISDLEDGATGDDPKVIISQKVTFDEESVLRRRAGMEEKQEQEEVQQGAAGQLTSLI
LPLAGTTGGHDIQVEHLSKVSPQVERTRMDDRGREVQQERAGPRTDIGVAQHKPKRTIRQ
PDRYSFEEMLSYALPPKHQVQDLESLEKRLIQVPLRSGVDLRLFEARADEEDSNQADFVK
GLGSSPEVSRSVRCWFRCTQDMATSLSLRSLLDNDNLVGSNFSSWYQKLKIVLKHEWILY
VIMNPTSEEPAINACGTVRDTYQKWLSDRTIVRCIILATMSDKFSHRFEMTQPKDMLQVL
KDAFGTLDDMERHKTSCTIFNAKMKDGASVTDHVLYMIELMEHLSKLGFLLHEQLGKDAI
LNSLPKSYLPFLTHYRMTKPKVNYHRLLGSLQNFEKDHQLHKESTGYWIPVALTIFAIHC
RGCRSVGDSSKMTPRGQTRVQLATSSQARISEVRMSNLQGS
>FGENESH:   2   6 exon (s)  55059  -  57263   209 aa, chain -
MEEAVLPSRDIICAFNYSCCCLHKRTDLVLYFKHAFHALSKKGGIFVMDLYGGRSSECKL
RLQRRFSDFTEFKLNRWICKHENTGKLHVQYVWEQAEFDIINRRTRISLHFHLGKKQMLR
HAFAYDWRLWSLPEIKDCLEEAGFQYVRFWMRQMPNTDDRENLEEFTVGRDVNSGPQVCF
KDDIFWEGPLLPRKLLVESKYGIVMGDDR
>FGENESH:   3   1 exon (s)  63518  -  63826   102 aa, chain -
MENMFGLHFFKQQEEPLDHVDVERQHQEEPVEARTSLMDSWLRHLPRVSRMNQVWMMLEM
AVTMATWMAATLVGNAIVVTNDRGLVGGIGEGRAGEMKGGRT
 FGENESH 2.6 Prediction of potential genes in LODEDO genomic DNA
 Time    :   Tue May 11 09:25:30 2010
 Seq name: ladeda.Contig3 
 Length of sequence: 69484 
 Number of predicted genes 6: in +chain 3, in -chain 3.
 Number of predicted exons 13: in +chain 9, in -chain 4.
 Positions of predicted genes and exons: Variant   1 from   1, Score:203.581589 
   G Str   Feature   Start        End    Score           ORF           Len

   1 +      TSS       9009               -7.98
   1 +    1 CDSf      9251 -      9641   24.85      9251 -      9640    390
   1 +    2 CDSl     10242 -     10249   -3.43     10244 -     10249      6
   1 +      PolA     13135                0.44

   2 +      TSS      16053               -2.58
   2 +    1 CDSf     17962 -     20440   65.54     17962 -     20439   2478
   2 +    2 CDSl     26356 -     26387   -3.23     26358 -     26387     30
   2 +      PolA     26633                0.44

   3 -      PolA     30294                0.44
   3 -    1 CDSl     31221 -     31798   14.35     31221 -     31796    576
   3 -    2 CDSf     31859 -     32150   -2.91     31860 -     32150    291
   3 -      TSS      32837               -5.98

   4 -      PolA     36362                0.44
   4 -    1 CDSo     36407 -     36763   13.60     36407 -     36763    357
   4 -      TSS      38955               -3.78

   5 +      TSS      56907               -6.78
   5 +    1 CDSf     57016 -     57062    1.38     57016 -     57060     45
   5 +    2 CDSi     57773 -     57842    6.03     57774 -     57842     69
   5 +    3 CDSi     59171 -     59847   41.19     59171 -     59845    675
   5 +    4 CDSi     60496 -     60724   13.17     60497 -     60724    228
   5 +    5 CDSl     60812 -     62302   98.33     60812 -     62302   1491
   5 +      PolA     62334               -1.06

   6 -      PolA     66672               -1.06
   6 -    1 CDSo     67097 -     67606   21.17     67097 -     67606    510
   6 -      TSS      67917               -8.48

Predicted protein(s):
>FGENESH:   1   2 exon (s)   9251  -  10249   132 aa, chain +
MSNEFSRRFETAQPKDMLQVLEDAFGIPDDTERHKTSCAIFNAKMRGGASVTDHVLYMIE
LMKHLSKLGFSLHEQLRKDAIPNSLLKSYLPFLTHYRITKPEVNYHRLLGLLQNFEKDHQ
LHKESVNLVGDI
>FGENESH:   2   2 exon (s)  17962  -  26387   836 aa, chain +
MAEPIQPMTLKDLCYPVGSIQPSCIRLPQPTANNFEIKPQIINMLPKFTGLEDAYIFIRE
FEEVCATMKLQLTEDEVKLRLINFALKDNAKKWLYSLPNYSVTTWEGFVRIFLKKYFPHH
KTARIRNEINQFYQLAGESFWKYFDRFKNLLTQCPHHGIETWRLCQIIYEGLDSNSRTML
EFMCQGQFMDKETTEAWQFLEDLAEKNLQWETTREPDKATPSRGGMHQIQPTLASEAKIA
TLTRRLEALELQRPANVNQISAPMCKGCNAPNHVLEECSYSNECAQVNATYQGPLNNPYA
PTYNPGWRNHPNFSWSQNPNVGNPNFNQQNLRSNPVMNNPPGFHDNDKKITSLEKSLEAM
MKTHTSFMQTTGQLINNNTQAIARLEMQVSQLASTISEREHGRLPSQHEPNPRNQNGPRP
QQGNQVNGINAIHTLRSGKQIDNKVVALDDIDDSSAESPSKTTTFQPQAPETENSPSPVL
KSPRAPFPNRLKSNKSEHLDKILEVFKQVQVNIPLLDIIHQVPTYAKFLKDLCTRKRTTN
VPKKAFLAASVSSYLSSHVPIKYKDPGAPTISCVIGETNIKKALLDLGASVNILPYSVYE
QLGLEKLQPTGITLQLADRSLRIPKGMVEDVLIKVENFIFPVDFIVLETEPVANPKGHIP
VILGRPFLATANAEINCRNGLMKLSFGNMTIELNVFNLEQESSSHADVNVVQDGIYESID
ISDDEVDLESNPWLIHESEDVNEILKENQINQESTLPTEPIIEMVNSSPKPSIEEAPILE
LKPLPEHLKYAYLGPKETLPVIIASDLDPKQEEELLSVLKANQEAIGLLDEFCRIL
>FGENESH:   3   2 exon (s)  31221  -  32150   289 aa, chain -
MTAEPSPAPAPVSDPTPASSQFPLSPNKISLSNQKLEYGKNIDFKFFEKDGFSIRSKIKS
QRWEFYCLLKENTYVNLVREFYLNLNYYNGIVKSSVKGYTHMELPIKEEGLSVILGRAFT
KNLSKLEAMILSVEMRLLHHMVTKLFVPKSGKHDLLSSKDICIMYHVIIETPLNLPTLMI
EAMREILNRSKAHLPYGTALILVFRRFGVCFEGEAVTRLSHSDIINRHTLHRIGFSKIDG
GWSKGVEERAEEEGPSSPPHDHRASPGILFGSDHETGPSESVRRDASVP
>FGENESH:   4   1 exon (s)  36407  -  36763   118 aa, chain -
MRKRSPIKGEHSKEKDKEQPLFCYECKKLRNFRSEYPQLKKGRKKYKKKAMVATWSDSDE
SSSEEEDSHEQANLYLMAHKNEVNTETPNDFTFEELQEVFYDLVDDLKKLGVKNKELK
>FGENESH:   5   5 exon (s)  57016  -  62302   837 aa, chain +
MVAIIKLLQKQALEKSSFSISRLRARRTSNPQCPPEEDSSHKEILSQGSLWQSQFLKPPS
EINAVYPSSQKEDLRVVLEVMIRKQGRRNNAVVVGDSVSITEGLVAEFMGRVERREVPDE
LKSARFIKLHLSYVHLRLMSREEVDMKVDDLRRRILSLASDRVGGGVIIYAGDLRWAVDE
ETKDGLGFRPVEHMIREMGRLLSELRSSNGNGGGAVTNKVWLLATASYQTYMRCQRRQPS
LETQWALQAVVVPSGGLALSLQAQSGLDWRMTKLGQHPLQMLELKTFNSNEEEKKLICCA
ECASNFEKEASVFKSEKRDTSNGSNHLPIWLQPHKPDSHHEDALPELRRKWNRFCLSLHH
GQHNQAHLYPPSFTQGFVGKSCTHASSYPWWSTSLPHNQNKSFVVSHSTSLPENAIYGSA
SFTPQIANGTGSWQERDVSNNWPSEVSLNFVKKPANQEVRTTLALGSPLFSDSATSKNQR
RGEMADPQELSRLLEENIPWQSGTIPSIIEALHDCRSSEKKGTWLLIEGNDHIGKRRLAR
IVAEIFCGSSDRLIHINMSTLGRGSSRTDIFTEASKKDQKHAVLVEGIDRAHPNSIKLIA
EGIKNGFSRDAFGREAGLANGFYILTTSSSTKFDNADENPDGALKMRLSVEEANTPHDLK
RRPERELPDKSKKSRTEESSLDLNLCAQEEEVDQRDNEEDGVPSDLTDETETGDPNLPYE
LLESMTTRFTMNASPDRFCRLSESLLLKLHQAFEEVVGSEEGTGQLCVDQMAVEELIIAS
GSFLESLLDKWVRQVFQMSLATVKKSGKVRLGVEGKEGNVWEFGFQGSVLPSRIHVD
>FGENESH:   6   1 exon (s)  67097  -  67606   169 aa, chain -
MVNWIGGAVVRLYMRHLEPTRNRLVEDESGEMLDGLKVDVVRRLLSVYLELGKPTVNFFE
PTFVVVDLSVLGDPRGRSLPMNLRGRRMVSAAASPSSLDPAGKEKVAKTGGCHAVAASPL
LDGSAEMATPEEETETDAGVDDCSWTASSALPVAPPTSAATGLVVVEGS
 FGENESH 2.6 Prediction of potential genes in LODEDO genomic DNA
 Time    :   Tue May 11 09:25:30 2010
 Seq name: ladeda.Contig4 
 Length of sequence: 27962 
 Number of predicted genes 3: in +chain 2, in -chain 1.
 Number of predicted exons 12: in +chain 4, in -chain 8.
 Positions of predicted genes and exons: Variant   1 from   1, Score:60.056526 
   G Str   Feature   Start        End    Score           ORF           Len

   1 -      PolA      2016               -1.06
   1 -    1 CDSl      2646 -      2692    0.22      2646 -      2690     45
   1 -    2 CDSi      2805 -      2857    4.08      2806 -      2856     51
   1 -    3 CDSi      3174 -      3254    5.16      3176 -      3253     78
   1 -    4 CDSi      3507 -      3530    0.32      3509 -      3529     21
   1 -    5 CDSi      3575 -      3747   -1.39      3577 -      3747    171
   1 -    6 CDSi      3818 -      3889    4.28      3818 -      3889     72
   1 -    7 CDSi      3979 -      4109    1.84      3979 -      4107    129
   1 -    8 CDSf      4228 -      4300    4.06      4229 -      4300     72
   1 -      TSS       4376               -2.88

   2 +      TSS       9772              -10.38
   2 +    1 CDSf      9852 -     10814   33.31      9852 -     10814    963
   2 +    2 CDSl     11214 -     11897   23.30     11214 -     11897    684
   2 +      PolA     12037               -4.66

   3 +      TSS      20234               -7.08
   3 +    1 CDSf     21328 -     21790   26.96     21328 -     21789    462
   3 +    2 CDSl     22499 -     22521   -1.98     22501 -     22521     21
   3 +      PolA     22587               -2.36

Predicted protein(s):
>FGENESH:   1   8 exon (s)   2646  -   4300   217 aa, chain -
MENQAMVSLLLGLAILAVVDGNSEVDILYSQRLAWTDPNNVLQSWDPTLVNPCTWFHVTC
NNDNSVIRGSGGGRVGWASYPTAGNVGKPSIPELIRDEWLCRELFGNRISGSIPKELGKL
SHLVSLDLQQNLLSGPIPSSLGNIESLRYLYDLNFISRRLNGNMLTGEIPIEILNLIRTG
NLRVMNVSGNYLVGTIRRSEQTGFTVTTIIQDRRASN
>FGENESH:   2   2 exon (s)   9852  -  11897   548 aa, chain +
MKLQLTEDEVKLRLINFALKDNAKKWLYSLSNHSVTTWEGFVRTFLKKYFPHHKTARIRN
EINQFYQLAGESFWKYFDRFKNLLTQCPHHGIETWRLCQIIYEGLDSNSRTMLESMCQGQ
FMDKETTEAWQFLEDLAEKNLQWETTREPDKATPSRGGMHQIQPILASEAKIATLTRRLE
ALELQRPANVNQISAPMCKGCNAPDHVLEECSYSNECAQVNATYQGSLNNPYAPTYNPGW
RNHPNFSWSQNPNVGNPNFNQQNLRSNPVMNNPSGFHDNDKKITYLEKSLEAMMKTHTSF
MQTTGQFINNNTQAIARLEMQVPTYVKFLKDLCTRKRTTNVPKKAFLAASVSSYLSSHVP
IKYKDPGAPTISCVIGETNINKALLDLGASVNILPYSVYEQLGLEKLQPTGITLQLADRS
LRIPKGMVEDVLIKVENFIFPVDFIILETEPVANPKGHIPVILGRPFLATANAEINCRNG
LMKLSFESMTIELNVFNLEQESSSHADVNVVQDGIYESIDISDDEVDLESNPWLIHESED
VNEILKEN
>FGENESH:   3   2 exon (s)  21328  -  22521   161 aa, chain +
MATILSLRSLLDNDKLMGPNFDSWYRKLKIVLEHEQILYVVTDPAPEEPAPNASKAIRDT
YLKWLNDRTIVRCIMLAAMNDEFSRRFENAQPQEMLQMLNDSFGTPDDVERHKTSCAIFN
ARMRDGASVTDHVLYMIEMIERLSKLGFPLHEQLGFHIDGL
 FGENESH 2.6 Prediction of potential genes in LODEDO genomic DNA
 Time    :   Tue May 11 09:25:30 2010
 Seq name: ladeda.Contig5 
 Length of sequence: 36070 
 Number of predicted genes 2: in +chain 1, in -chain 1.
 Number of predicted exons 4: in +chain 2, in -chain 2.
 Positions of predicted genes and exons: Variant   1 from   1, Score:33.815792 
   G Str   Feature   Start        End    Score           ORF           Len

   1 +      TSS       6481               -7.78
   1 +    1 CDSf      6556 -      6972   21.41      6556 -      6972    417
   1 +    2 CDSl      7036 -      7362   21.88      7036 -      7362    327
   1 +      PolA     10127                0.44

   2 -      PolA     27416               -2.36
   2 -    1 CDSl     27912 -     27919   -9.95     27912 -     27917      6
   2 -    2 CDSf     28011 -     28473   26.30     28012 -     28473    462
   2 -      TSS      30716               -5.08

Predicted protein(s):
>FGENESH:   1   2 exon (s)   6556  -   7362   247 aa, chain +
MVLLCANVATSLSLRSLLDNDKLVGPNFGSWYRKLKIVLEHERILYVIIDPAPEEPAVNA
RGTIRDTYQKWLSDQTTVRCIMLAIMSDEFSRRFETAQPKDKLQVLEDAFGTPDDVERHK
TSCAIFNAKMRDGASVTDHLGKDAILNSLPKSCLPFLTHYRMTKPEVNYHGLMGLLQNFE
KDHQLLKESVNSVNSVGGSSSGSRPFEKGKKNKKKKVKKVQVQAGTSVQSQTKKIKPDKS
LFYWQAP
>FGENESH:   2   2 exon (s)  27912  -  28473   156 aa, chain -
MATILSLRSLLDNDKLMGPNFDSWYRKLKIILEHEWILYVVTDPAPEEPASNASKAIRDT
YQKWLNDHTTIRCIMLAAMNDEFSRRFENAQPQEMLQILNDSFGTPDDVERHKTSCAIFN
ARMRDGASVTDHVLYMIEMIEHLSKLGFSLHEQLGC
 FGENESH 2.6 Prediction of potential genes in LODEDO genomic DNA
 Time    :   Tue May 11 09:25:30 2010
 Seq name: ladeda.Contig6 
 Length of sequence: 67913 
 Number of predicted genes 5: in +chain 2, in -chain 3.
 Number of predicted exons 16: in +chain 6, in -chain 10.
 Positions of predicted genes and exons: Variant   1 from   1, Score:160.726456 
   G Str   Feature   Start        End    Score           ORF           Len

   1 +    1 CDSi       171 -       521    8.27       171 -       521    351
   1 +    2 CDSl      2575 -      3084   23.42      2575 -      3084    510
   1 +      PolA      4090               -1.06

   2 -      PolA     25004                0.44
   2 -    1 CDSl     25795 -     26787   34.26     25795 -     26787    993
   2 -    2 CDSf     30839 -     32113   33.97     30839 -     32113   1275
   2 -      TSS      32457               -5.68

   3 +      TSS      33215               -3.88
   3 +    1 CDSf     33777 -     34553   31.84     33777 -     34553    777
   3 +    2 CDSi     36159 -     36249    6.54     36159 -     36248     90
   3 +    3 CDSi     38468 -     39248   13.56     38470 -     39246    777
   3 +    4 CDSl     39321 -     40080   16.89     39322 -     40080    759
   3 +      PolA     40554                0.44

   4 -      PolA     50392                0.44
   4 -    1 CDSl     50974 -     50981   -4.83     50974 -     50979      6
   4 -    2 CDSf     51092 -     51554   26.87     51093 -     51554    462
   4 -      TSS      52613               -7.08

   5 -      PolA     60418                0.44
   5 -    1 CDSl     61369 -     61461   -1.08     61369 -     61461     93
   5 -    2 CDSi     62078 -     62252    8.15     62078 -     62251    174
   5 -    3 CDSi     64603 -     64874   15.87     64605 -     64874    270
   5 -    4 CDSi     65647 -     66020   15.48     65647 -     66018    372
   5 -    5 CDSi     66474 -     66672    8.28     66475 -     66672    198
   5 -    6 CDSf     66736 -     67080   18.94     66736 -     67080    345
   5 -      TSS      67859               -6.18

Predicted protein(s):
>FGENESH:   1   2 exon (s)    171  -   3084   286 aa, chain +
EPIPSNFKLLQFESYDGTTDPVDHLEAFRTMMLLHGMPDAILCRAFPSILKGAARNWYST
LKSGTIFSFDQMSHQFTAHFVSSRHPQRGSKSLINIKQKEGESIRTYVNRFNAVVLELCH
QADSKSRKYWGRPSLQVGYTGFGRTTQRLLTGETSFTLAFETEAVIPIKLKLPSVRVVAF
DEQHNSQDLKANLNLSEEKRETAQVRMAAYKQKVARYYNSRVKNKAFKAGDLVLRRAAVS
QPQNQRKLTPNWEGPYEVKEVVQPETYYLKELGRADLLRLWNSKNL
>FGENESH:   2   2 exon (s)  25795  -  32113   755 aa, chain -
MWSIIVNGPHTPTKIIDGEESTKPEKEWDEVDKKLAQLNAKAMNVLYYTLDANEFNRIST
CASAKKIWDRLEVTHEGTNQVKETKINMLVHKYELFKIEHDESITAMFTHFTDIINGLKS
LGKSYTNSELVRKILRSLPRTWEAKVTAIQEAKDLNTLPLEELLGSLMTHELSMKQHQED
EIKKKRTIALKSTTSPDYETDDTEDEEQDEEMALITRKFKKFLRKRKQGMRKKFTKGEQS
KEKEKDQPLICYECKKPEHFRSECPQLKKGPKKFKKKAMMATWSASDDSSSDEETSTEQA
NLCLMAHENEVTSESTGEFTFEELHEAFYDSIDELKKLGKKNKELKLKNQSLVKQAENLS
IEKFTLIQENQNLKDEINKLKSIVDKFTLSSNKLNMILDNQKAIYDKAGLGYKPLKKQKF
LKDIYEVTYVDLVREFYQNLLYGNGSVTSTVKGIDICLDSRILGEILQLPSEGYSYMKLP
IKEEGIRIILGETYSGSLNKLEAKILSIEMRVLHQIVTKLFFPRSGRHDLLSSRDVCVMF
HVITQTPLNLPALMIEAMRETLNRSKAHLPYGMALTRVFRRFGVSCEGEASTKLSHVDTF
NQHSLHRMGFTKTDGGWIKGSEERIEERTEDRAEDRTEGRVEEEGPSSPVHDFRAASPDI
QFIPDTEAGPSEFTRMSTPVYQPESRAPHSEFRLADDQIELISQRVASLLSSQWSSTSFA
PGATSSDQTITPHISTVFQMISDQSIRIQQLEDTV
>FGENESH:   3   4 exon (s)  33777  -  40080   802 aa, chain +
MTHELSMKQHQEEEVKKKRTIALKSIAPPDEETDDTENEEQDKEMALITRRFKKFLRKRK
QGMRKRPFTKGEQSKEKDKDQPLICYECKKPGHFKSEYAQLKKGLKKYKKKAMMATWSAS
DDSSSKEEDSTEQAKLCLMAHENEVIFETPSDFTFEELHEAFYDLVDELKKLGIKNKDLK
LKNQSLLKQNESISIEKSSLLQENQSLKNEIAKLKPLVEKFTLSSNKLNMILESQKAVYD
KAGLGYNPLKKQKYLKNIYMMRNMKTNRMRKVKNIKNNLEVQMTYLKNGVVRMAPKMKLP
QRRKSVRELEEGVRRKRQASQTSSASIPASASAPGSSQFPLSPSKIPLSVRKVEPRKNID
FRFFEKEGFSIGSKIKNQGWGFYCSLKEVTYVDLVREFYLNLCYGNGTVTSTVKGIDICL
DPVILGEILYLPCEGYSNMELPVKEEEINVILGGTYSGSLNKLEAKILSIEMRILHQLIT
KLFFPRSGRHDLLSGRDICIMFHVITQTPLNLPALMIEAMRETLNRSKAHLPFGMALTLV
FRRFGVSFEGTDGGWIKGAEERVEDRAEEEGPSSPLHDIRAASPDIQFISNLEAGPSEST
RRHTPIQLPDSRELPSEIRLADDQIEMISQRMASLLSRQWDTSVFALGSTSFDTSDQNLI
PHISTVFQMISDQSVHIQQLEGYILRLTGRVLDLQGQVLALAHPQPQECITEVSDLSMEA
TRFRGVLESEFDFLRREIRGSSEHASTQFTALLQSVSRALNLLDTIRLSLAVQSVASQPS
GSSRPPTRASTSTRGRGRQGRG
>FGENESH:   4   2 exon (s)  50974  -  51554   156 aa, chain -
MATTLSLRSLLDNDKLMGSNFDSWYRKLKIVLEHERILYVVTDPAPEEPAPNASKAIRDT
YLKWLNDRTTVRCIMLAAMNDEFSRRFENAQPQEMLQMLNDSFGMPDDVERHKTSCAIFN
ARMRDGASVTDHVLYMIEMIERLSKLGFPLHEQLEL
>FGENESH:   5   6 exon (s)  61369  -  67080   485 aa, chain -
MDSNMKVDFKKFDGKENFSMWKIRVEDLLVQADLDQALDEKPKGMIDRQWASLEKKACSV
IRGCLADATLYSVLEEKTPKGFWSKLHIMYMGKNMCNKLMLKKRLYSLRMQEGSDLDEED
KSLLLLCSLSGSYDSLVTTLLYGKETLKYEDMVSMLRSNEQREKLTRDRAPQDGLAVGER
TGYLERSGYSFSSRARSGVLNISNGAMVVMRGRRLDNNLYRMEGSVVIGESDTAVATQDQ
QGAYRMWHYRLGHMGDKGLRELSRRGLISDLENGATGEICEPCQMGKQRRVQFNISTTCS
AAPLELVLLEDMTFRWSTYIRCLHRRRGLGWMIEVERSSRSELDRGLILVLPYTSPRGPS
GNQTDMASRRCCHMSLVTVNGDPYTYQEAIESQNRERPDLIGYQILDFLEVILEALFIWN
ERLTKKIATMLISSRAFNRVQKSPDLFVAGFTAPKIRSITLQVGHSNLADPGLRMMLQTT
HASDL
 FGENESH 2.6 Prediction of potential genes in LODEDO genomic DNA
 Time    :   Tue May 11 09:25:30 2010
 Seq name: ladeda.Contig7 
 Length of sequence: 34145 
 Number of predicted genes 3: in +chain 2, in -chain 1.
 Number of predicted exons 11: in +chain 9, in -chain 2.
 Positions of predicted genes and exons: Variant   1 from   1, Score:61.143749 
   G Str   Feature   Start        End    Score           ORF           Len

   1 +      TSS       1056               -3.38
   1 +    1 CDSf      1145 -      1517   18.10      1145 -      1516    372
   1 +    2 CDSi      1629 -      1736    0.81      1631 -      1735    105
   1 +    3 CDSi      1838 -      2100   17.50      1840 -      2100    261
   1 +    4 CDSi      2198 -      2455   13.53      2198 -      2455    258
   1 +    5 CDSi      2576 -      2694    7.28      2576 -      2692    117
   1 +    6 CDSi      4899 -      4991    4.40      4900 -      4989     90
   1 +    7 CDSi      5113 -      5218   13.12      5114 -      5218    105
   1 +    8 CDSl      6541 -      6678    3.71      6541 -      6678    138
   1 +      PolA      7127                0.44

   2 +      TSS      17229               -6.28
   2 +    1 CDSo     18411 -     18629    8.30     18411 -     18629    219
   2 +      PolA     18737                0.44

   3 -      PolA     22911               -2.36
   3 -    1 CDSl     22966 -     23124    4.40     22966 -     23124    159
   3 -    2 CDSf     23783 -     23965   11.71     23783 -     23965    183
   3 -      TSS      24922               -7.48

Predicted protein(s):
>FGENESH:   1   8 exon (s)   1145  -   6678   485 aa, chain +
MRRVLLCLLLCFLVGIEASATTRQGDALNKLVFDAFRLKRTAVGSSSSFTTPRISNLRSI
SYPQQGLKKKDRIEYLPGQPEGVDFDEYAGYVTVDQKAGRALFYYFVQAVGDSSSKPLLL
WLNGGPGCSSLGYGAMQEIGPFRVMSDGKTLFRNPFAWNGVANVLFLESPAGVGFSYSNT
TSDYSKSGDSRTAEDNYVFLVNWMERFPEYKGRDFYIAGESYAGHLVPDLATTILQQKNT
NINLNGIMIGNAVINDATDNRGMFDYLWTHALISDETIDAIHKYCSFSPNATNQEYRCGD
AMSVAREVSTVLNIYNIYAPPCSSGITNTPKRLSIKNFDPCSVDYVDTYLNRAEVQQKLH
ANVTKLNYTWSGCSQVIQQWLDSPSTVLPLIKKLMASNIRVWIYSGDVDGRVPVTSTRYS
INELLLPVKKQWYPWYIGNKACGYGVTYHGNLTFATVKGAGHEVPSYKAQQALQLVKFFL
EGNPI
>FGENESH:   2   1 exon (s)  18411  -  18629    72 aa, chain +
MEPGWSHRAKGGGGAAGGGVVGSRSLGERGHLEVGPVWRWCQHGRSGYRTLKWGVGEVRT
LERGIGVENGRE
>FGENESH:   3   2 exon (s)  22966  -  23965   113 aa, chain -
MASIMTKFSRFMKKKKQGYKKKLFIKREGSKKKEKESICYECKKSRHFKVDCLYLKKIPK
KVCLAIYRLKKRWYLNSEYLRYMVEDEAQFITLQAKHGEVMTFGDNSTRRWVT
 FGENESH 2.6 Prediction of potential genes in LODEDO genomic DNA
 Time    :   Tue May 11 09:25:30 2010
 Seq name: ladeda.Contig8 
 Length of sequence: 52055 
 Number of predicted genes 2: in +chain 1, in -chain 1.
 Number of predicted exons 4: in +chain 3, in -chain 1.
 Positions of predicted genes and exons: Variant   1 from   1, Score:91.759041 
   G Str   Feature   Start        End    Score           ORF           Len

   1 +      TSS       6545               -3.48
   1 +    1 CDSf      7515 -      7615   -3.37      7515 -      7613     99
   1 +    2 CDSi      7953 -      8037    9.24      7954 -      8037     84
   1 +    3 CDSl      9097 -      9390    8.33      9097 -      9390    294
   1 +      PolA      9809                0.44

   2 -      PolA     18915               -1.06
   2 -    1 CDSo     19667 -     21301  100.47     19667 -     21301   1635
   2 -      TSS      24351               -3.68

Predicted protein(s):
>FGENESH:   1   3 exon (s)   7515  -   9390   159 aa, chain +
MYAYNPLSLMVPSVIQIFIEQLESVLQGDETSIRFVTSGEIRKRSEFFEPFIAGLTNSTV
DQFCKASVEPMGEESDHVHITALSDALGVPIRVVYLDRSSCDSGTVSINHHDFVPSSKSP
QEGTAQSSEVKTGHPVTLTPTPFVTLLYRPGHYDILYPK
>FGENESH:   2   1 exon (s)  19667  -  21301   544 aa, chain -
MAVAASRTFLLFHPKLLEASGIFSGFPRHRRNLPLLLRRSSSQSATQPTLEDSTRNLDSI
AGIPNVVDILQERGLVESITSESIRSACSNPSISPLKVYCGFDPTAESLHLGNLLALIVL
SWFRRCGHKAVAMIGGATGRIGDPSGKSLERPELDVETLEKNSAGIKNLISKILGSGNLD
AGTGNEKALDVGSEKGSIFDTGVRENANLNSHSENNVNSNVGIEKNAALDSRLDDSFTIL
NNYDWWKDITLLDFLREVGRFARVGVMMAKESVKKRLMSEEGMSYTEFSYQLLQGYDFLY
LFKNMGVNVQIGGSDQWGNITAGTELIRKILQVEGAYGLTFPLLLKSDGTKFGKSEGGAI
WLSPSLLSPYKFYQYFFSVPDVDVVRFLKILTFLSMEEIQELEEEMKKQGYVPNTAQRRL
AEEVTRFVHGEEGLAEALKATETLRPGAETKLDWETIEGIAEDVPSCCLAYDQVLNSSLV
DLSVSTGLLSSKSAARRLMKQGGLYLNNRRVDNEAKMIEAGDIVDGKLLLLSAGKKNKIV
IRIS
 FGENESH 2.6 Prediction of potential genes in LODEDO genomic DNA
 Time    :   Tue May 11 09:25:30 2010
 Seq name: ladeda.Contig9 
 Length of sequence: 59042 
 Number of predicted genes 8: in +chain 3, in -chain 5.
 Number of predicted exons 21: in +chain 7, in -chain 14.
 Positions of predicted genes and exons: Variant   1 from   1, Score:288.675720 
   G Str   Feature   Start        End    Score           ORF           Len

   1 -      PolA      5617                0.44
   1 -    1 CDSo      6504 -      6935   15.46      6504 -      6935    432
   1 -      TSS       7084              -10.68

   2 +      TSS      21768               -5.88
   2 +    1 CDSf     23340 -     23349   -1.96     23340 -     23348      9
   2 +    2 CDSl     24061 -     24644   28.56     24063 -     24644    582
   2 +      PolA     25166               -2.56

   3 -      PolA     28131               -1.06
   3 -    1 CDSo     28882 -     29430   16.25     28882 -     29430    549
   3 -      TSS      29758               -1.18

   4 -      PolA     29865                0.44
   4 -    1 CDSl     30096 -     30544   19.54     30096 -     30542    447
   4 -    2 CDSi     30672 -     31877   33.43     30673 -     31875   1203
   4 -    3 CDSi     33069 -     33234    7.06     33070 -     33234    165
   4 -    4 CDSf     33298 -     33570   12.80     33298 -     33570    273
   4 -      TSS      33752               -8.08

   5 +      TSS      34362               -1.48
   5 +    1 CDSf     34534 -     34541    4.10     34534 -     34539      6
   5 +    2 CDSi     37586 -     38369   22.98     37587 -     38369    783
   5 +    3 CDSi     38432 -     39085   28.07     38432 -     39085    654
   5 +    4 CDSl     40050 -     41552   71.62     40050 -     41552   1503
   5 +      PolA     41652               -9.36

   6 +      TSS      42172              -11.18
   6 +    1 CDSo     42266 -     42787   22.16     42266 -     42787    522
   6 +      PolA     42864               -6.96

   7 -      PolA     42942               -4.66
   7 -    1 CDSl     43049 -     43483   27.49     43049 -     43483    435
   7 -    2 CDSi     43757 -     43936    1.65     43757 -     43936    180
   7 -    3 CDSi     44118 -     44630   35.48     44118 -     44630    513
   7 -    4 CDSi     44695 -     45158   13.95     44695 -     45156    462
   7 -    5 CDSi     45312 -     45702   18.79     45313 -     45702    390
   7 -    6 CDSf     46502 -     46837   17.14     46502 -     46837    336
   7 -      TSS      47288               -6.88

   8 -      PolA     53236                0.44
   8 -    1 CDSl     53248 -     53271   -8.62     53248 -     53271     24
   8 -    2 CDSf     53706 -     54158   22.10     53706 -     54158    453
   8 -      TSS      54393               -9.88

Predicted protein(s):
>FGENESH:   1   1 exon (s)   6504  -   6935   143 aa, chain -
MRETLNRSKAYLPFGIALTLVFRRFRVSFEGEAAARLSHSDTINQHTLHRMGFTRTDGGW
TKGAEERVEDRAEEEGPSSPLHDIRTASPDIQFVSDPEAGPSESTRRHTPVQQPDSRAHP
SEIKLADDQIEMISQRVASLLSR
>FGENESH:   2   2 exon (s)  23340  -  24644   197 aa, chain +
MSLAITTTLSLRSLLDNDKLMGPNFDSWYQKLKIILEHERIFYVVTDPALEEPALNARGV
VRDTYQKWLNDCTIIRCIMLAAMNDEFSHRFENAQPQEMLQMLNDSFGTPDDVERHKTSC
AIFNARMRDGASVTDHVLYMIEMIERLSKLGFPLHEQLGKDAILNSLPKSFLPFLTHFLD
DKTCSELPRLVGVAAEL
>FGENESH:   3   1 exon (s)  28882  -  29430   182 aa, chain -
MPPRKASTRRSTASTARSHAPASPPVSQPPPPPPPTATVGAEQFDLLAQQVKDLVETVQA
MQQQQPQASAHPEGASPECQNPTAGRATWASRPVLPGKANPRVESPQSDHDSTPGRSLPP
FCERTLETRSREDFLDRRLQEMNRRIEELRHAPPAYGEDICTDPPFSQMIMQEPILPNFK
LP
>FGENESH:   4   4 exon (s)  30096  -  33570   697 aa, chain -
MDPAPEEPAVNAHGTVRDTYQKWLSDRTMVRCIMLTVMSDEFSHRFETAQPKDMLQVLED
AFGTLDDVERHKTSCAIFNVKMRDGASVTDHLGKDAILNSLPKSYLPFLTHYRMTKPEVN
YHGLSGLLQNFEKDHQLHKELLNLVGESATAQPRPDSYGSWALPQHQNSSARTPTGAGLC
RNIRTAPPGLLREPGSAATIEQLRPDSYGSWTPPQHQNSSARTPTGAGLRRNNRTAPPGL
LRELGSTTTSEQLRPDSYGSRAPPQQQNSSARTPTGVGLCRNNRTAPPELLREPGSAATI
EQLRPDSYGSRTPPQHQNCSARTPTGAELRRNNRTAPPGLLREPGSTATTEQLLPDSYGS
RALPQQQNSSAWTPTGAGLRRNIRTAPPGLLREPGSAATSEQLRPNSYGSPALPQHQNSS
ARTPTGAGLCRNIRTAPPGLLRESGSAATTEQLRPDSYGSRAPPQQQNSSTRTPTGVGLR
HNIGTAPLGILREPSSAADIGTAPPGLLREPGSSVTSEQLRPDSYGSRAPPQHQSSSART
PTEPGPALKDSARTPTGAGFRPQLQLREGSTRTPTGVGLRLQHQLQSSSARTPTGAGLRL
RHQLQSSSARTPTRAGLRFRHPLQHGSARTPTEVRLRPRPQPPGGPLPDLYRGRAPTVAE
LQSTDPPPLASHQNGHDPAPLPVTDFRTAPSFPDKPQ
>FGENESH:   5   4 exon (s)  34534  -  41552   982 aa, chain +
MASSAQTPTGAGLHRRHQHGSVRAPTGAGLHRRHQHSSNRAPTGVGLHRRHQHSSARTPT
GVGLHRRHQHSSARTPTGAGLHHRHQHGSYGSRAPPPTSARLRSGSYGSRAPPPTSARLL
RESGSTADISTALPGLLREPGSTVDISTAPLGLLREPGSTADISTAPPGLLREPGSTADI
STAPPGLLREPGSTADISTAPPGLLREPGSTADISTAPTGAGLHRRHQHSSARTPTGVGL
HRRQQHSSAQTPTGAGLQPQCQLLLRPDSYGSRAPTSMSAAGKLHPDPYGSRTSPLTLIA
TQLHPDSYGSRAPTSMSAAGKLRLDPYGSRTSPLTLIATQLCPDSYGSRAPTSMSVAGKL
RPDPYGSRTSLLTLIATQLRPDSYGSRAPPPTAAQLRPDSYGSRAPLSVSTAGKVHLDSY
REPDFAFNFKLQEDFARALKGAELHLRRQRLQPQADSARTPTGAGFRPQLRLREGSARTP
PGSPPPPPPATAVGAEQFDLLAQQVKGLVEAVQAMQQQPPQASTHPEGASPKCQNPVVGQ
ATWASRPVLPGKANSRVESPQSDHDSTPGRSLPPFCQRTLETRSREDFLDWRLQEMNRWI
EELRHAPPAYGEDICTDPPFSQMIMQEPIPSNFKLPQFKSYDGTSDPIDHLEAFRTMMLL
HDAPDAILCRAFPSTLKGAARNWYSALKSGTIFSFDQMSHQFVAHFVSSRRPRKGSESLI
NIKQREGESIRAYVNRFNIAALEVRNLDQSVAMAALKGGLQKNDLLYSLEKKYPRDFADL
LARAEGYARAEEAFKMKDEETAREHQAGDSGKLAVEKRPKEARPRSRSPPGHKRAHTPPR
ARRQRSPDNRFRRGSPSGKFCNYAPLNTSKAQVLMEVREQLPMSERMRTHPGKRNPNKFC
LYHRDHGHDTEECIQLQDEIEELIRRGQLDRFIRRRPEDRRDRPRALPPPEPQKREEQPG
DRPPIGTIDSITGGLQGGAGIL
>FGENESH:   6   1 exon (s)  42266  -  42787   173 aa, chain +
MEGPDSYESRVPPPRKASPRLLREPSSAAKESFARTPTGAGFRRQGKLHPDSYGSRVPPP
RKASPGLLREPGSAAKESFTRTPTGVGFRRPGKLRPDSYGSRVPPPRKASPGLLREPGSA
AQESFARTPTGAGFHSQGKLHPDSYGSRVPSPRKASPGLLREPGSIRYFTSKG
>FGENESH:   7   6 exon (s)  43049  -  46837   772 aa, chain -
MAEPGSRRSPGRAVLLSKEEPGSRRSPGGAVPLEVDSVKDFGCGYFIPNTSPTTSEFELQ
AKEVHREKGGYSRNRLFKFCVLPPPDILALNERVPESFRIGAVQGDASKIPQVFDRVSLS
LPHSRGPAIPLLVQALYTFKRHPSAKDWWYFFPQFGKKGLLKGAPSSIHNWKEKFLFVYC
PTLELGLPPWGSLRDSVRRAPSLGEDDLQAAQKLLSYPAPFLPNLLREQLLFNIGLSPQD
PATMDAEAMRMLAKAMRAQKRKGVSASGSAKRARVEETSLAAPVQAAPTIDIPSDAEPAV
PRASSRSPPTGAPIPGARPTEAPTAGRRRKSVARRASSHQAAVDESVCSEGGSENPFNDK
DLIRRLLDGCILSDVVERIDRVDPEQRAWDSLGSFLEIGHQLFAYVEASSCMRRELLLAE
ERCQAEIARLQAKTAEVAALQGALKREGQAREEERQAWEEERRSLEESARKAEAEVAHLT
EQTPVLVSEARTLAVEEFKASAEMRELNVQFGLEAFTKGFELCRERVASRYPDLDFGFLE
ESEDEAGPSSAATAVAPPAPSSPPPAPECPAEALPLPLGVPLKSAVQRLKKEVLHLTKKL
KKSEDELRKSRKCYSEAAAEAAHFRSLQRASWRRQVEEYKGRFHQAADEVVRLQRQLVTR
VQLTNAQDAEELLALRGTVEGISISLGEKTAELQQVKIQLALERKAVADAEAESEVLRKR
HREAEAESRHLRQTLQDTLRKKEEQEEVVENLRQSWLRDGGDNPRSEGAGPP
>FGENESH:   8   2 exon (s)  53248  -  54158   158 aa, chain -
MNDEFSRRFENAQPQEMLQMLNDSFGTPDDIERHKTSCAIFNARMRDGASVTDHVLYMIE
MIERLSKLGFPLHEQLGKDAILNFLPKSFLPFLTHFRMTKPAVNYHELLGLLQNFEKDHQ
LHKESVNVVGESSSRRQPFGRGENKKKKNKKAFWPCTL
 FGENESH 2.6 Prediction of potential genes in LODEDO genomic DNA
 Time    :   Tue May 11 09:25:30 2010
 Seq name: ladeda.Contig10 
 Length of sequence: 103616 
 Number of predicted genes 8: in +chain 1, in -chain 7.
 Number of predicted exons 21: in +chain 1, in -chain 20.
 Positions of predicted genes and exons: Variant   1 from   1, Score:251.348099 
   G Str   Feature   Start        End    Score           ORF           Len

   1 -      PolA     15402                0.44
   1 -    1 CDSl     16459 -     16567    0.58     16459 -     16566    108
   1 -    2 CDSi     18117 -     18387   21.40     18119 -     18385    267
   1 -    3 CDSi     18628 -     18716   -0.19     18629 -     18715     87
   1 -    4 CDSi     19167 -     19642   23.80     19169 -     19642    474
   1 -    5 CDSi     19713 -     19944   -2.67     19713 -     19943    231
   1 -    6 CDSi     20065 -     20663   35.20     20067 -     20663    597
   1 -    7 CDSf     20776 -     20910    4.59     20776 -     20910    135
   1 -      TSS      21374               -6.78

   2 +      TSS      36585               -9.18
   2 +    1 CDSo     37383 -     37913   30.69     37383 -     37913    531
   2 +      PolA     38758               -1.06

   3 -      PolA     53599               -2.36
   3 -    1 CDSl     53843 -     53856   -0.91     53843 -     53854     12
   3 -    2 CDSf     54115 -     55555   63.79     54116 -     55555   1440
   3 -      TSS      55843               -8.58

   4 -      PolA     58841                0.44
   4 -    1 CDSl     59008 -     59013   -4.29     59008 -     59013      6
   4 -    2 CDSi     60104 -     60481   16.17     60104 -     60481    378
   4 -    3 CDSf     60599 -     61162   12.68     60599 -     61162    564
   4 -      TSS      61379               -7.88

   5 -      PolA     83154                0.44
   5 -    1 CDSo     83744 -     84082   10.56     83744 -     84082    339
   5 -      TSS      84525               -2.28

   6 -      PolA     84630               -5.46
   6 -    1 CDSl     84954 -     85175    2.44     84954 -     85175    222
   6 -    2 CDSi     85238 -     86108   22.02     85238 -     86107    870
   6 -    3 CDSf     86632 -     86879    9.45     86634 -     86879    246
   6 -      TSS      86970              -10.78

   7 -      PolA     87055               -4.26
   7 -    1 CDSo     87713 -     89299   87.84     87713 -     89299   1587
   7 -      TSS      89632               -2.28

   8 -      PolA     89737               -5.46
   8 -    1 CDSl     90061 -     90711    8.52     90061 -     90711    651
   8 -    2 CDSi     90769 -     90980   13.52     90769 -     90978    210
   8 -    3 CDSf     99513 -     99975   20.36     99514 -     99975    462
   8 -      TSS      99979              -10.18

Predicted protein(s):
>FGENESH:   1   7 exon (s)  16459  -  20910   636 aa, chain -
MILEAFFIWNERLMKKIATRLISSRAFNRIQKSPDLFVAGSATPKQGTIKVYSTLLDFIL
LVWLGSSHGQQMKVKFEKFDGKKNFFMWKIQVEDLLVQADLDQALDEKPEGMIDRQWASL
EKKACSMIRGYLTNAVLYAVLEERTPKGLWSKLHTTYMGKNMCNKLMLKKRLYSLRMQEG
SDVIGHIQRFDQLCTELMNIGVKLDEEDKSLLLLCSLPGSYDSLVTTLLYGKETLEYEDM
VSVLRKGKKEMKCFKCNEFGHFKRECPLWKSKKGERSGSESVSAVAGQQVEDDLLVVSDG
HRHYTEEWNTRLCMLTSLHTTQVAGIGTVRVRMFDGIVRILTNVKHVLELEKNLVSLGYL
ERSGYSFSSRARSEVLNISNGAMVVMRGRRLDNNLYRMEGSVVIGESDAAAAAQDQHGAY
RMWHYRLGHMGDKGLRELSRRGLISDLEDGATGEICEPCQMGKQRRVQFNISTTRSAAPL
ELPKEVWSGRTVGLGHLRVFGCTAYMHIGAGTMGGYDIQVENLPKMSPQVERTQTDDRGG
EVQQERAGLRTDIGVALHKPKRTIRQPDRYGFEEMLSYILVTVNGDPYMYQEAIESQDRE
RMELVEALGHQGRDCCDPDGVPKAQGTKAKAKVHHS
>FGENESH:   2   1 exon (s)  37383  -  37913   176 aa, chain +
MSDEFNRRFETTQSKNMLQVLEDAFGTPDDVERHKTSCAIFNAKIQDGASVTNHVLYMFE
LKECLSKLGFPLHEQLGKDAILNSLPKFYLPFLTHYRMTKPEVNYHGLLELLQNFEKDHQ
LHKESVNLVGGSSSGSRPFEKGKKNKKKKVKKVQVQAGTSVQGQIKKIKPDKSLFY
>FGENESH:   3   2 exon (s)  53843  -  55555   484 aa, chain -
MAPKMKLPQRRKSIREPEEIVRKKRHAQSSTVPNPVSVPAQGPSQPSISPSVNLLSDRKV
ETGKNIDFRFFEKEGFTFATKIKNQGWELYCSLKEVTYVDLVREFYQNLNYGNGSVTSTV
KGIDICLDSRILGEILQLPSEGYSYMELPIKEEGIRIILGEDFSGSLNKLEAKLLSIEMR
VMHQIVTKLFFPRSGRHDLLSGRDVCVMFHIITQTPLNLPTLMIEAMRETLNRSKAHLPY
GMALTRVFRRFGVSCEGETPTKLSHVDTFNQHSLHRMGITKTVGGWIKGSEERAEERAEE
RAEDRTEGRVEEGPSSPVHDFRAASPDTQFIHDTEAGPSEFTRMPTPVYQPESRAPHSEF
RLADDQIEHISQRVASLLSSQWSSTSFAPGATSSDQTITPHISTIFQMISDQSVRIQQLE
DTVWRLTGRVLDLQGQVLALAHPQPQESTIEVTDLTAEAGRLRGALEGGYELLRKEIRGS
SSRS
>FGENESH:   4   3 exon (s)  59008  -  61162   315 aa, chain -
MATHVGTSLAEGQSTNRPPLFNGSNYTYWKARIKIFIQALDYDMWSIIVNGPHTPTKIID
GEESTKPEKEWDEVDKKLAQLNAKAMNVLYCALDASEFNRISTCASAKEIWNRLEVTHEG
TNQVKESKINMLVHKYELFKIEHDESITAMFTRFTDIINGLKSLGKSYTNSELVRKILRS
LPRTWEAKKRTIALKSTTSPDYETDDSEDEDQDEEMALITRKFKKFLRKRKQGMRKKFTK
GDQSIEKEKDQTPICYECKKPGHFRSECPQLKKGPKKFKKKAMMATWSASDDSSSDEETS
TEQANLCLMAHENEI
>FGENESH:   5   1 exon (s)  83744  -  84082   112 aa, chain -
MNDEFSRRFENAQPQEMLQMLNDSFGTPDDVERHKTSCAIFNARMRDGASVTDHVLYMIE
MIERLSKLGFPLHEQLDKDAILNSLPKSYLPFLTHFRMTKTAVNYHDLLGLL
>FGENESH:   6   3 exon (s)  84954  -  86879   446 aa, chain -
MAPDVKTGRGPAPNAGSSAETGAWGFEAEELPELTGAEESEDIFFWGKNLKGPRKADREG
NETPKVNSEEDTKEMKRGEAPRRRNPQRNRHQCSSARTPTGVGLHHRQQVQLRPDSYGSR
TPPPTSEQLRPDSYGSRVPLSVSTDGKLHPDSYQSRTSPLTLIAVQLRPDSYGSRAPPPT
ASAALPGLLREPGSTTISKCSSARTPTGAELHRRHQCSSARTPTGAGLHRRQQVQLCPDS
YGSRAPPPSASAAPPGLLREPGSIDDISAAPPGLLWEPGSTADSKCSSTRTPTGAELHRR
QQVQLRPDSYGSRAPPPTASAAPPGLLREPGSTADSKCSSARTPTGAGLRRQHQNSSART
PTGVGLHSQYQLMLRPDSYGSRAPPPTASAAPPRLLREPGSTHNFNTEGVPPGLPRESGS
AHDPYRQEDLTRTSTETGLRPLPSFN
>FGENESH:   7   1 exon (s)  87713  -  89299   528 aa, chain -
MPPRRASTRRSTASAARSQAPASPPVSQPAPPPPPATAVGAEQFDLLAQQVKGLIEAIQA
MQQQPPQASAHPEGASPECQNPAVGRATWASRPVLLGKANPRVESPQSDHDSTPGRSLPP
FCQRTLETRSREDFLDRRLQEMNRRIEELHHAPPAYGEDICTDPPFSQMIMQEPIPPNFK
LPQFESYDGTSDPVDHLEAFRTMMLLHGAPDAILCRAFPSTLKGAARNWYSALKPGTIFS
FDQMSHQFVAHFVSSRRPRKGSESLINIKQREGESIRAYVNRFNIAALEVRNLDQSVAMA
ALKGGLQKNDLLYSLEKKYPRDFADLLARAEGYARAEEAFKMKDEETARERQAEDSSKPT
VEKRPKEARPHSRSPPGHKRAHTPPRARRQRSPDNRFRRGSPSGKFCNYAPLNASKAQVL
MEVREQLPRPERMRTHPGKRNPNKFCLYHRDHGHDTEECIQLQDEIEKLIRRGRLDRFIH
RRPEGRGDRPRALPPPEPQKREEQLGDRPLIGTIDSIVGGPQGGAGEL
>FGENESH:   8   3 exon (s)  90061  -  99975   441 aa, chain -
MATTLSLRSLLDNDKLMGPNFDNWYRKLKNILEHERILYVVTDPAPEEPAPNSSKMIRDT
YQKWLNDRTTVRCIMLAVMNDEFSHRFENVQPQEMLQMLNDSFGTPDDVERHKTSCAIFN
AWMRDGASVTDHVLYMIEMIEHLSKLDFPLHEQLAVGYKIPTVGTLNGIDISAAPPRLLR
EPGSTADSKCSSARTPTGAGLRRQHQNSSARTPTGAGFRSQYQLMCSSVRTPTGAGLHRR
QQVQLRPDSYGSQAPPPSASVAPPGLLREPGSTDDISAAPPGLLREPGSTTDSKCSSART
PTGVGLHRRQQVQLRPDSYGSRTPPPTSEQLRPDSYGSRAPLSVSTDGKLHPGSYQSQTS
PLTSIVVQLRPDSYGSRAPPPTASAAPPGLLREPGSTHNFSTEGVPPGLPRESGSAHDPY
RQEDLTRTSTETGLRPLPSFN
 FGENESH 2.6 Prediction of potential genes in LODEDO genomic DNA
 Time    :   Tue May 11 09:25:31 2010
 Seq name: ladeda.Contig11 
 Length of sequence: 61989 
 Number of predicted genes 6: in +chain 4, in -chain 2.
 Number of predicted exons 49: in +chain 42, in -chain 7.
 Positions of predicted genes and exons: Variant   1 from   1, Score:251.532104 
   G Str   Feature   Start        End    Score           ORF           Len

   1 -    1 CDSl       129 -       376    6.05       129 -       374    246
   1 -    2 CDSi       474 -       657   10.69       475 -       657    183
   1 -    3 CDSi       727 -      1026   15.92       727 -      1026    300
   1 -    4 CDSf      1294 -      1437    4.21      1294 -      1437    144
   1 -      TSS       1870               -2.58

   2 +      TSS      13938               -3.58
   2 +    1 CDSf     14530 -     14655    6.96     14530 -     14655    126
   2 +    2 CDSl     14939 -     15025   -1.41     14939 -     15025     87
   2 +      PolA     15129                0.44

   3 -      PolA     15546               -1.06
   3 -    1 CDSl     16652 -     16936   31.68     16652 -     16936    285
   3 -    2 CDSi     17081 -     17180    2.90     17081 -     17179     99
   3 -    3 CDSf     17343 -     17521    7.44     17345 -     17521    177
   3 -      TSS      18795               -2.78

   4 +      TSS      26976               -5.18
   4 +    1 CDSf     27257 -     27259   -7.62     27257 -     27259      3
   4 +    2 CDSi     27848 -     28033   19.42     27848 -     28033    186
   4 +    3 CDSi     28197 -     28236    4.62     28197 -     28235     39
   4 +    4 CDSi     28621 -     28785    0.67     28623 -     28784    162
   4 +    5 CDSi     29114 -     29172    6.07     29116 -     29172     57
   4 +    6 CDSi     30184 -     30274   -2.49     30184 -     30273     90
   4 +    7 CDSl     31356 -     31417    6.85     31358 -     31417     60
   4 +      PolA     32388                0.44

   5 +      TSS      33721               -6.18
   5 +    1 CDSf     33891 -     34256   29.01     33891 -     34256    366
   5 +    2 CDSi     34798 -     34938   14.84     34798 -     34938    141
   5 +    3 CDSi     36136 -     36282    7.41     36136 -     36282    147
   5 +    4 CDSi     36408 -     36560   19.27     36408 -     36560    153
   5 +    5 CDSi     36669 -     36798   10.71     36669 -     36797    129
   5 +    6 CDSi     39764 -     39810    0.07     39766 -     39810     45
   5 +    7 CDSi     39991 -     40010    1.27     39991 -     40008     18
   5 +    8 CDSi     40327 -     40593    3.75     40328 -     40591    264
   5 +    9 CDSi     41211 -     41331   14.71     41212 -     41331    120
   5 +   10 CDSi     42298 -     42352   -0.77     42298 -     42351     54
   5 +   11 CDSi     42529 -     42656    0.12     42531 -     42656    126
   5 +   12 CDSi     43582 -     43632    7.74     43582 -     43632     51
   5 +   13 CDSi     43736 -     43835   -0.04     43736 -     43834     99
   5 +   14 CDSi     44637 -     44698    0.90     44639 -     44698     60
   5 +   15 CDSi     45726 -     45827   11.78     45726 -     45827    102
   5 +   16 CDSi     46511 -     46633   18.92     46511 -     46633    123
   5 +   17 CDSi     47815 -     47958    6.95     47815 -     47958    144
   5 +   18 CDSi     48057 -     48128    4.45     48057 -     48128     72
   5 +   19 CDSi     48206 -     48281    1.39     48206 -     48280     75
   5 +   20 CDSi     48358 -     48500   14.15     48360 -     48500    141
   5 +   21 CDSi     48625 -     48733   -1.96     48625 -     48732    108
   5 +   22 CDSi     48813 -     49000   18.64     48815 -     49000    186
   5 +   23 CDSi     52078 -     52167   16.89     52078 -     52167     90
   5 +   24 CDSi     52297 -     52479   20.95     52297 -     52479    183
   5 +   25 CDSi     52693 -     52821    1.56     52693 -     52821    129
   5 +   26 CDSi     52988 -     53158   22.13     52988 -     53158    171
   5 +   27 CDSi     53261 -     53328   -3.98     53261 -     53326     66
   5 +   28 CDSl     53728 -     53950    3.17     53729 -     53950    222
   5 +      PolA     54023                0.44

   6 +      TSS      59572               -7.48
   6 +    1 CDSf     59678 -     59815    6.24     59678 -     59815    138
   6 +    2 CDSi     59960 -     60157    2.15     59960 -     60157    198
   6 +    3 CDSi     60749 -     60956    2.59     60749 -     60955    207
   6 +    4 CDSi     61013 -     61297    6.35     61015 -     61296    282
   6 +    5 CDSi     61355 -     61639   15.26     61357 -     61638    282

Predicted protein(s):
>FGENESH:   1   4 exon (s)    129  -   1437   291 aa, chain -
MMVGVEQFDLLAQQVRGLTEAVQAIQQQQQPQASMRLKRASSEHQNPTESILPNFKLPQF
ESYDGTSEPIDHLEAFRTMMLLHGTPDAILCRAFPSTLKGATRNWYSVLKSGTIFSFDQM
SHQFVTHFVNSRCPRKSSESLINIKQRESVAMAALKGGLQKNDLLFSLEKKYPRDFADLL
ARAEEYARAEEAFRMKDEETARERQAGDSSRDPDHGVRQGSPPGRFHNYAPLNASKTQVL
MEVREQLPRPERMRTHPGKRNPNKFCLYHRDHGHDTEECIQLWDEIEELIR
>FGENESH:   2   2 exon (s)  14530  -  15025    70 aa, chain +
MGMDIFESFSIIAVQKKFLLVVIDYFIKWVKVEALTTIIEAKRVPTDETPFKLAFGTEAV
ISLEIGLPTL
>FGENESH:   3   3 exon (s)  16652  -  17521   187 aa, chain -
MSPLMEVLVDAEAPDIRKPLVTIGSPDLYLGGPYCRPMLKPSTLKAGCFESMICETLFFG
EVEEKAAQVTRRVDDAQLHKLKAKKENKSSQAEDIKAEFSSASYLQGIKDLKKKIRNGFP
DLNLDLLDLDKEEEVSEIEDDGLRAEDLFNPVHEEPTIEEVALALPPIVIILSNHVEVGE
SHALKGA
>FGENESH:   4   7 exon (s)  27257  -  31417   201 aa, chain +
MAMYIRVKRNKTTYFVQCDPTETTLDIKQKLQTLIDEPSTNQCLTLVATNDVLDDSKTLA
EQKVENDAVVALTLRKDLFGNHLCDKNIWHLCFLHMHVNSAPTCLTLRHPLFAKFYDNIP
AFMGPFRDLCQGLAYHIELDGTERTILYQYAGWNTVWNSIQRSYLYAISSYMEGTAGYTS
LYGNEFEEVYIAQPENLKSFS
>FGENESH:   5  28 exon (s)  33891  -  53950  1202 aa, chain +
MEWPGSKVRETFISFFEGKEHVNWRSSPVVPLDDPTLLFANAGMNQFKPIFLGTVNPANP
LGKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKREAVSWAWELL
THVYKLPTDRIYATYFGGDEKAGLPADTEARDIWLKFLPRGRVLPFGSKDNFWEMGDTGP
CGPCTEIHFDRVGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLRSLPAKHVDTGMG
FERLTSILQNKMSNYDTDVFLPIFDAIQQLTGARPYSGRVGLDDVDKVDMAYRVVADHIR
TVSFAIADGSRPGNEGREYVLRRILRRAGVGMYSWSEAMMLGQYDGLVWHEVFNSMKCLN
KIEETDNGVKYGNWRRFTRLPREVGAATCKCETVIDLSKHKMLEVDRRTGTKVKLTEHAI
FEICLVGIVVKVMGDVFPELKQYEAKIKEIIAEEETSFGKTLVKGIEKFKRAAQDVHGSI
LSVCVPHNFYLFPLSFLGVGEDGVFGGHGMLLGFCLYMVPHIFQKDAFILWDTYGFPMDL
TELMAEERGLIVDVEGFNVAMEEARQKARSARNKAYFLGLLWMPHQVTVHNLLSWEAVGD
TIVMDADATSELHRKGVATTDDSYKFIWHQDHESVIKAIYTGAEFLETALAGDDVGLVLE
STSFYAEQGGQIYDTGSIGGLFGSFQVSNVQVYGGFVLHIGSIAGGAKAFSVGDKVICKV
DYVRRTLIAPNHTCTHMLNFALREVLGDHVDQKGSIVLPEKLRFDFSHGKPVHPEDLRKI
ESIVNQQIKDELDVYAREASLVAAKQITGLRAVFGEIYPDPVRVVSIGCKVEDLLADPDN
TQWLSYSTELCGGTHISNTREAKAFALLSEEGIAKGIRRITAVTTECAFKAIELALTLAS
EISDASKCEGGLLEKKVASLKSKIDAAAIPAAMKADLRAKISQLEDQVRKAKKKIGEENI
QKAIQAATKIAEAAASEGKAFCISRVDVGLDTTAVREAVLKVMDQKIHFYFILILSTASY
HHNHAFPEACNTNIYIIHVYTCICTYPHKGLATMVFSTDETLNKAVVYAGVPKSKDGLGV
LEWLTAAMGPLKGKGGGGKNGIAQGQGSDASYVDEAMDVASKLASMKLGSEVIFLLPSSA
SVRWYFRVVALASWTRHHNALLRVLAPSKSAKFCNEITMLTKLAKGVVTKIGLATNRLAF
MV
>FGENESH:   6   5 exon (s)  59678  -  61639   371 aa, chain +
MLHKELLVNLTILGHPGKATAFLLIEGSHHLKYANLARAGVVQVFLAHRMGRRQHYSFLF
SVRPWLFQDWATPEWVVDPYKAGSIRHPASCLGYGIREEDYGKLLSVTTRMLLLPESLAD
FFQPGSTPIRTPPDSSNGRFLQLSDFGPDSYGSRTSSPTPATGRLRPDSYGSRAPSSIST
DGRLRPGSYGSRISSLTPNAERLRPDSYESRAPSSIPIAGKLHPDSYGSRTSPLTVFVGR
LRPGSYGSRISSLTPNAERLRPDSYGSRAPSSIPIAGRLRPGSYGSRISSLTPNAERLRP
DSYGSRAPSSIPIAGKLRPDSYGSRTSPLTMFARRLRPDSYGSRISSPSPNAERLRPDSY
GSRALSSIPIA
 FGENESH 2.6 Prediction of potential genes in LODEDO genomic DNA
 Time    :   Tue May 11 09:25:31 2010
 Seq name: ladeda.Contig12 
 Length of sequence: 145770 
 Number of predicted genes 9: in +chain 5, in -chain 4.
 Number of predicted exons 27: in +chain 19, in -chain 8.
 Positions of predicted genes and exons: Variant   1 from   1, Score:448.961578 
   G Str   Feature   Start        End    Score           ORF           Len

   1 +    1 CDSi       129 -       563   27.12       129 -       563    435
   1 +    2 CDSi       651 -       770   20.30       651 -       770    120
   1 +    3 CDSl      1421 -      2074   50.75      1421 -      2074    654
   1 +      PolA      2157               -4.66

   2 -      PolA     13971                0.44
   2 -    1 CDSo     14092 -     15123   60.88     14092 -     15123   1032
   2 -      TSS      15484               -3.88

   3 +      TSS      75783               -3.08
   3 +    1 CDSf     76050 -     76101   -4.10     76050 -     76100     51
   3 +    2 CDSi     77034 -     77147    4.97     77036 -     77146    111
   3 +    3 CDSi     77204 -     77317   -0.17     77206 -     77316    111
   3 +    4 CDSi     77544 -     77658    7.65     77546 -     77656    111
   3 +    5 CDSi     78821 -     79098    5.43     78822 -     79097    276
   3 +    6 CDSi     79146 -     79410   13.51     79148 -     79408    261
