[console_scripts]
blat_nanopore = circtools.scripts.bash_runner:blat_nanopore
blat_output_processing = circtools.nanopore.blat_output_processing_v3:main
circtools = circtools.circtools:main
circtools_circtest_wrapper = circtools.scripts.r_runner:circtools_circtest_wrapper
circtools_enrich_visualization = circtools.scripts.r_runner:circtools_enrich_visualization
circtools_exon_wrapper = circtools.scripts.r_runner:circtools_exon_wrapper
circtools_install_R_dependencies = circtools.scripts.r_runner:install_R_dependencies
circtools_primex_formatter = circtools.scripts.r_runner:circtools_primex_formatter
circtools_primex_wrapper = circtools.scripts.r_runner:circtools_primex_wrapper
circtools_quickcheck_wrapper = circtools.scripts.r_runner:circtools_quickcheck_wrapper
circtools_reconstruct_coverage_graph = circtools.scripts.r_runner:circtools_reconstruct_coverage_graph
circtools_reconstruct_summarized_coverage_profiles = circtools.scripts.r_runner:circtools_reconstruct_summarized_coverage_profiles
circtools_reconstruct_visualization = circtools.scripts.r_runner:circtools_reconstruct_visualization
circtools_sirna_formatter = circtools.scripts.r_runner:circtools_sirna_formatter
combine_annot_segments = circtools.nanopore.combine_annot_segments:main
create_igv_script = circtools.scripts.create_igv_script:main
create_igv_script_from_gene_names = circtools.scripts.create_igv_script_from_gene_names:main
create_igv_script_from_position_list = circtools.scripts.create_igv_script_from_position_list:main
detect_new_exons_from_fuchs_data = circtools.scripts.detect_new_exons_from_fuchs_data:main
flank2_combine = circtools.nanopore.flank2_combine:main
guided_denovo_circle_structure = circtools.reconstruct.guided_denovo_circle_structure_parallel:main
make_circRNAs_from_annot = circtools.nanopore.make_circRNAs_from_annot.txt:main
novel_exons_and_alternative_usage = circtools.scripts.bash_runner:novel_exons_and_alternative_usage
psl2bed12.py = circtools.nanopore.psl2bed12:main
wonderdump = circtools.scripts.bash_runner:wonderdump
