a
BedtoolsIntersectArgs
absolute
CannoliFn
add
CommandBuilder
addArgument
CommandBuilder
addArguments
CommandBuilder
addEnvironment
CommandBuilder
addFile
CommandBuilder
addFiles
BcftoolsMpileupArgs BcftoolsNormArgs BedtoolsIntersectArgs Bowtie2Args BowtieArgs BwaArgs FreebayesArgs GemArgs Minimap2Args SamtoolsMpileupArgs VepArgs VtNormalizeArgs CommandBuilder
addMount
CommandBuilder
addMounts
CommandBuilder
alignWithBowtie
CannoliFragmentDataset
alignWithBowtie2
CannoliFragmentDataset
alignWithBwa
CannoliFragmentDataset
alignWithGem
CannoliFragmentDataset
alignWithMinimap2
CannoliFragmentDataset
annotateWithSnpEff
CannoliVariantContextDataset
annotateWithVep
CannoliVariantContextDataset
apply
BcftoolsMpileup BcftoolsNorm BedtoolsIntersect Bowtie Bowtie2 Bwa Freebayes Gem Minimap2 SamtoolsMpileup SnpEff Vep VtNormalize
args
BcftoolsMpileup BcftoolsNorm BedtoolsIntersect Bowtie Bowtie2 Bwa Freebayes Gem Minimap2 SamtoolsMpileup SnpEff Vep VtNormalize
assembly
VepArgs