# This file created by conda-build 3.21.8
# meta.yaml template originally from:
# /opt/recipe, last modified Mon May  1 08:18:53 2023
# ------------------------------------------------

package:
  name: bohra
  version: 2.2.1
source:
  sha256: e2dcc69666a345733a5e753794a51ffd5b3b2b26a9d0e6464b9aba8c2d89ea40
  url: https://pypi.io/packages/source/b/bohra/bohra-2.2.1.tar.gz
build:
  entry_points:
    - bohra=bohra.bohra:main
  noarch: python
  number: '0'
  script: '/opt/conda/conda-bld/bohra_1682929315755/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/bin/python
    -m pip install . --no-deps --ignore-installed -vv '
  string: pyhdfd78af_0
requirements:
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 2_gnu
    - bzip2 1.0.8 h7f98852_4
    - ca-certificates 2022.12.7 ha878542_0
    - ld_impl_linux-64 2.40 h41732ed_0
    - libexpat 2.5.0 hcb278e6_1
    - libffi 3.4.2 h7f98852_5
    - libgcc-ng 12.2.0 h65d4601_19
    - libgomp 12.2.0 h65d4601_19
    - libnsl 2.0.0 h7f98852_0
    - libsqlite 3.40.0 h753d276_1
    - libuuid 2.38.1 h0b41bf4_0
    - libzlib 1.2.13 h166bdaf_4
    - ncurses 6.3 h27087fc_1
    - openssl 3.1.0 hd590300_2
    - pip 23.1.2 pyhd8ed1ab_0
    - python 3.11.3 h2755cc3_0_cpython
    - readline 8.2 h8228510_1
    - setuptools 67.7.2 pyhd8ed1ab_0
    - tk 8.6.12 h27826a3_0
    - tzdata 2023c h71feb2d_0
    - wheel 0.40.0 pyhd8ed1ab_0
    - xz 5.2.6 h166bdaf_0
  run:
    - any2fasta
    - biopython 1.81.*
    - csvtk
    - jinja2
    - nextflow 22.10.6.*
    - numpy 1.23.1.*
    - packaging
    - pandas 1.0.5.*
    - perl-list-moreutils
    - perl-svg
    - perl-text-csv
    - psutil
    - pytest
    - pytest-runner
    - python >=3.8
    - sh
test:
  commands:
    - bohra --version | grep -F '2.2.1'
    - bohra --help
  imports:
    - bohra
about:
  home: https://github.com/kristyhoran/bohra
  license: GNU General Public v3 (GPLv3)
  license_family: GPL3
  license_file: LICENSE.txt
  summary: Pipeline for analysing Illumina data for microbiological public health.
extra:
  copy_test_source_files: true
  final: true
  recipe-maintainers:
    - kristyhoran
    - tseemann
