## Uses of Class
biotransformer.biosystems.BioSystem.BioSystemName

Packages that use BioSystem.BioSystemName
biotransformer.biosystems
biotransformer.btransformers
biotransformer.transformation

### Uses of BioSystem.BioSystemName in biotransformer.biosystems

Fields in biotransformer.biosystems declared as BioSystem.BioSystemName
`BioSystem.BioSystemName` BioSystem.`name`

Methods in biotransformer.biosystems that return BioSystem.BioSystemName
`static BioSystem.BioSystemName` BioSystem.BioSystemName.`valueOf​(java.lang.String name)` Returns the enum constant of this type with the specified name.
`static BioSystem.BioSystemName[]` BioSystem.BioSystemName.`values()` Returns an array containing the constants of this enum type, in the order they are declared.

Constructors in biotransformer.biosystems with parameters of type BioSystem.BioSystemName
`BioSystem​(BioSystem.BioSystemName bsName, java.util.ArrayList<Enzyme> enzymes)`
`BioSystem​(BioSystem.BioSystemName bsName, org.codehaus.jackson.map.ObjectMapper mapper)`

### Uses of BioSystem.BioSystemName in biotransformer.btransformers

Methods in biotransformer.btransformers that return BioSystem.BioSystemName
`BioSystem.BioSystemName` Biotransformer.`getBioSystemName()`

Constructors in biotransformer.btransformers with parameters of type BioSystem.BioSystemName
`Biotransformer​(BioSystem.BioSystemName bioSName)`
`Cyp450BTransformer​(BioSystem.BioSystemName bioSName)`
`Deglycolyzer​(BioSystem.BioSystemName bioSName)`
`ECBasedBTransformer​(BioSystem.BioSystemName bioSName)`
`Phase2BTransformer​(BioSystem.BioSystemName bioSName)`

### Uses of BioSystem.BioSystemName in biotransformer.transformation

Fields in biotransformer.transformation declared as BioSystem.BioSystemName
`BioSystem.BioSystemName` MReactionsFilter.`bioSysName`

Methods in biotransformer.transformation that return BioSystem.BioSystemName
`BioSystem.BioSystemName` Biotransformation.`getBioSystemName()`

Constructors in biotransformer.transformation with parameters of type BioSystem.BioSystemName
`Biotransformation​(org.openscience.cdk.interfaces.IAtomContainerSet substrates, MRPatterns.ReactionName reactionType, java.util.ArrayList<Enzyme.EnzymeName> enzymeNames, org.openscience.cdk.interfaces.IAtomContainerSet products, BioSystem.BioSystemName bsysName)`
`Biotransformation​(org.openscience.cdk.interfaces.IAtomContainerSet substrates, MRPatterns.ReactionName reactionType, java.util.ArrayList<Enzyme.EnzymeName> enzymeNames, org.openscience.cdk.interfaces.IAtomContainerSet products, java.lang.Double score, BioSystem.BioSystemName bsysName)`
`MReactionsFilter​(BioSystem.BioSystemName bioSysName)`