## Uses of Class
biotransformer.biomolecule.Enzyme.EnzymeName

Packages that use Enzyme.EnzymeName
biotransformer.biomolecule: This class implements the class of metabolic enzymes.
biotransformer.biosystems
biotransformer.btransformers
biotransformer.esaprediction
biotransformer.transformation

### Uses of Enzyme.EnzymeName in biotransformer.biomolecule

Methods in biotransformer.biomolecule that return Enzyme.EnzymeName
`static Enzyme.EnzymeName` Enzyme.EnzymeName.`valueOf​(java.lang.String name)` Returns the enum constant of this type with the specified name.
`static Enzyme.EnzymeName[]` Enzyme.EnzymeName.`values()` Returns an array containing the constants of this enum type, in the order they are declared.

Constructors in biotransformer.biomolecule with parameters of type Enzyme.EnzymeName
`Enzyme​(Enzyme.EnzymeName enzName)`

### Uses of Enzyme.EnzymeName in biotransformer.biosystems

Methods in biotransformer.biosystems that return types with arguments of type Enzyme.EnzymeName
`java.util.LinkedHashMap<Enzyme.EnzymeName,​Enzyme>` BioSystem.`getEnzymeHash()`

### Uses of Enzyme.EnzymeName in biotransformer.btransformers

Methods in biotransformer.btransformers with parameters of type Enzyme.EnzymeName
`boolean` Biotransformer.`isValidSubstrate​(org.openscience.cdk.interfaces.IAtomContainer target, Enzyme.EnzymeName enzymeName)`
`java.util.ArrayList<Biotransformation>` Biotransformer.`metabolizeWithEnzyme​(org.openscience.cdk.interfaces.IAtomContainer substrate, Enzyme.EnzymeName enz, boolean preprocess, boolean filter, double threshold)`

Method parameters in biotransformer.btransformers with type arguments of type Enzyme.EnzymeName
`java.util.ArrayList<Biotransformation>` Cyp450BTransformer.`predictCyp450BiotransformationsForSpecificEnzymes​(org.openscience.cdk.interfaces.IAtomContainer substrate, java.util.ArrayList<Enzyme.EnzymeName> enzymeNames, boolean preprocess, boolean filter, double threshold)`

### Uses of Enzyme.EnzymeName in biotransformer.esaprediction

Methods in biotransformer.esaprediction with parameters of type Enzyme.EnzymeName
`boolean` ESSpecificityPredictor.`isPotentialSubstrateByReactionPatternMatching​(org.openscience.cdk.interfaces.IAtomContainer substrate, Enzyme.EnzymeName enz)`
`boolean` ESSpecificityPredictor.`isValidCyp450Substrate​(org.openscience.cdk.interfaces.IAtomContainer substrate, Enzyme.EnzymeName enz)`
`boolean` ESSpecificityPredictor.`isValidCyp450Substrate​(org.openscience.cdk.interfaces.IAtomContainer substrate, Enzyme.EnzymeName enz, java.util.ArrayList<ChemicalClassFinder.ChemicalClassName> chemClasses)`
`boolean` ESSpecificityPredictor.`isValidSubstrate​(org.openscience.cdk.interfaces.IAtomContainer substrate, Enzyme.EnzymeName enz)`
`boolean` ESSpecificityPredictor.`isValidSubstrate​(org.openscience.cdk.interfaces.IAtomContainer substrate, Enzyme.EnzymeName enz, java.util.ArrayList<ChemicalClassFinder.ChemicalClassName> chemClasses)`

### Uses of Enzyme.EnzymeName in biotransformer.transformation

Methods in biotransformer.transformation that return types with arguments of type Enzyme.EnzymeName
`java.util.ArrayList<Enzyme.EnzymeName>` Biotransformation.`getEnzymeNames()`

Method parameters in biotransformer.transformation with type arguments of type Enzyme.EnzymeName
`void` Biotransformation.`setEnzymeNames​(java.util.ArrayList<Enzyme.EnzymeName> elsit)`

Constructors in biotransformer.transformation with parameters of type Enzyme.EnzymeName
`Biotransformation​(org.openscience.cdk.interfaces.IAtomContainerSet substrates, MRPatterns.ReactionName reactionType, Enzyme.EnzymeName enzymeName, org.openscience.cdk.interfaces.IAtomContainerSet products)`

Constructor parameters in biotransformer.transformation with type arguments of type Enzyme.EnzymeName
`Biotransformation​(org.openscience.cdk.interfaces.IAtomContainerSet substrates, MRPatterns.ReactionName reactionType, java.util.ArrayList<Enzyme.EnzymeName> enzymeNames, org.openscience.cdk.interfaces.IAtomContainerSet products, BioSystem.BioSystemName bsysName)`
`Biotransformation​(org.openscience.cdk.interfaces.IAtomContainerSet substrates, MRPatterns.ReactionName reactionType, java.util.ArrayList<Enzyme.EnzymeName> enzymeNames, org.openscience.cdk.interfaces.IAtomContainerSet products, java.lang.Double score, BioSystem.BioSystemName bsysName)`