# This file created by conda-build 3.18.9
# meta.yaml template originally from:
# /opt/recipe, last modified Sat Oct 26 21:47:52 2019
# ------------------------------------------------

package:
    name: biopet-validatefastq
    version: 0.1.1
source:
    sha256: 001f36b95c5d39052b98d9858d359dc6940922811c0bcf907f8c0f5062ab5ead
    url: https://github.com/biopet/validatefastq/releases/download/v0.1.1/validatefastq-assembly-0.1.1.jar
build:
    noarch: generic
    number: '2'
    string: '2'
requirements:
    run:
        - openjdk >=8,<9
        - python
test:
    commands:
        - biopet-validatefastq --version
        - biopet-validatefastq --help
about:
    description: 'This tool validates a FASTQ file. When data is paired it can

        also validate a pair of FASTQ files.

        ValidateFastq will check if the FASTQ is in valid FASTQ format.

        This includes checking for duplicate reads and checking whether

        a pair of FASTQ files contains the same amount of reads and headers match.

        It also check whether the quality encodings are correct and outputs

        the most likely encoding format (Sanger, Solexa etc.).


        For documentation and manuals visit our github.io page: https://biopet.github.io/validatefastq'
    home: https://github.com/biopet/validatefastq
    license: MIT
    summary: This tool validates a FASTQ file.
extra:
    copy_test_source_files: true
    final: true
    notes: 'biopet-validatefastq is a Java program that comes with a custom wrapper
        shell script. By default ''no default java option'' is set in the wrapper.
        The command that runs the program is ''biopet-validatefastq''. If you want
        to overwrite it you can specify memory options directly after your binaries.
        If you have _JAVA_OPTIONS set globally this will take precedence. For example
        run it with ''biopet-validatefastq -Xms512m -Xmx1g''. '
