Package: vasp
Type: Package
Version: 1.2.4
Title: Quantification and Visualization of Variations of Splicing in
        Population
Author: Huihui Yu, Qian Du, Chi Zhang
Maintainer: Huihui Yu <yuhuihui2011@foxmail.com>
Description: Discovery of genome-wide variable alternative splicing events from 
    short-read RNA-seq data and visualizations of gene splicing information for 
    publication-quality multi-panel figures. 
URL: https://github.com/yuhuihui2011/vasp
BugReports: https://github.com/yuhuihui2011/vasp/issues
License: GPL (>= 2.0)
Depends: R (>= 4.0), ballgown
Imports: IRanges, GenomicRanges, S4Vectors, Sushi, parallel,
        matrixStats, GenomicAlignments, GenomeInfoDb, Rsamtools,
        cluster, stats, graphics, methods
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
biocViews: RNASeq, AlternativeSplicing, DifferentialSplicing,
        StatisticalMethod, Visualization, Preprocessing, Clustering,
        DifferentialExpression, KEGG, ImmunoOncology
Encoding: UTF-8
LazyData: false
RoxygenNote: 7.1.1
git_url: https://git.bioconductor.org/packages/vasp
git_branch: RELEASE_3_12
git_last_commit: 22d830e
git_last_commit_date: 2021-01-22
Date/Publication: 2021-01-23
NeedsCompilation: no
Packaged: 2021-01-24 03:55:09 UTC; biocbuild
Built: R 4.0.3; ; 2021-04-02 08:09:23 UTC; unix
