Package: TRESS
Type: Package
Title: Toolbox for mRNA epigenetics sequencing analysis
Version: 1.6.0
Authors@R: c(person(given = "Zhenxing",
                    family = "Guo",
                    role = c("aut", "cre"),
                    email = "zhenxing.guo@emory.edu"),
            person(given = "Hao",
                   family = "Wu",
                   role = "ctb"))
Description: This package is devoted to analyzing MeRIP-seq data. Current functionalities include 1. detect transcriptome wide m6A methylation regions 2. detect transcriptome wide differential m6A methylation regions.
Imports: utils, rtracklayer, Matrix, matrixStats, stats, methods,
        graphics, GenomicRanges, GenomicFeatures, IRanges, Rsamtools,
        AnnotationDbi
Depends: R (>= 4.1.0), parallel, S4Vectors
biocViews: Epigenetics, RNASeq, PeakDetection, DifferentialMethylation
License: GPL-3 + file LICENSE
Encoding: UTF-8
LazyData: false
Suggests: knitr, rmarkdown,BiocStyle
VignetteBuilder: knitr
RoxygenNote: 7.1.1
git_url: https://git.bioconductor.org/packages/TRESS
git_branch: RELEASE_3_17
git_last_commit: 1848f25
git_last_commit_date: 2023-04-25
Date/Publication: 2023-04-25
NeedsCompilation: no
Packaged: 2023-04-25 23:08:23 UTC; biocbuild
Author: Zhenxing Guo [aut, cre],
  Hao Wu [ctb]
Maintainer: Zhenxing Guo <zhenxing.guo@emory.edu>
Built: R 4.3.1; ; 2023-07-14 10:08:39 UTC; unix
