%>%	pipe
.addLagsToTimeSeries	dot-addLagsToTimeSeries
.imputeData	dot-imputeData
.TimeSeriesExperiment	TimeSeriesExperiment
addLags	addLags
assayCollapsed	collapsed-data
assayCollapsed,TimeSeriesExperiment-method	collapsed-data
assayCollapsed<-	collapsed-data
assayCollapsed<-,TimeSeriesExperiment-method	collapsed-data
assignClusterDynamic	assignClusterDynamic
assignClusterStatic	assignClusterStatic
clusterAssignment	clusterAssignment
clusterAssignment,TimeSeriesExperiment-method	clusterAssignment
clusterData	clusterData
clusterMap	clusterAssignment
clusterMap,TimeSeriesExperiment-method	clusterAssignment
clusterTimeSeries	clusterTimeSeries
colData<-,TimeSeriesExperiment,ANY-method	colData
colDataCollapsed	collapsed-data
colDataCollapsed,TimeSeriesExperiment-method	collapsed-data
colDataCollapsed<-	collapsed-data
colDataCollapsed<-,TimeSeriesExperiment-method	collapsed-data
collapseReplicates	collapseReplicates
colnames<-,TimeSeriesExperiment-method	row_and_colnames
dataToTimeSeries	dataToTimeSeries
differentialExpression	differentialExpression
differentialExpression,TimeSeriesExperiment-method	differentialExpression
dimensionReduction	dimensionReduction
dimensionReduction,TimeSeriesExperiment-method	dimensionReduction
endoderm_small	endoderm_small
filterFeatures	filterFeatures
groups	groups
groups,TimeSeriesExperiment-method	groups
groups<-	groups
groups<-,TimeSeriesExperiment-method	groups
makeTimeSeries	makeTimeSeries
makeTimeSeriesExperimentFromExpressionSet	makeTimeSeriesExperimentFromExpressionSet
makeTimeSeriesExperimentFromSummarizedExperiment	makeTimeSeriesExperimentFromSummarizedExperiment
meltMatrix	meltMatrix
normalizeData	normalizeData
pathwayEnrichment	pathwayEnrichment
plotEnrichment	plotEnrichment
plotHeatmap	plotHeatmap
plotSamplePCA	plotSamplePCA
plotTimeSeries	plotTimeSeries
plotTimeSeriesClusters	plotTimeSeriesClusters
plotTimeSeriesPCA	plotTimeSeriesPCA
replicates	replicates
replicates,TimeSeriesExperiment-method	replicates
replicates<-	replicates
replicates<-,TimeSeriesExperiment-method	replicates
rowData<-,TimeSeriesExperiment-method	rowData
rownames<-,TimeSeriesExperiment-method	row_and_colnames
runPCA	runPCA
show,TimeSeriesExperiment-method	show-methods
timepointDE	timepointDE
timepoints	timepoints
timepoints,TimeSeriesExperiment-method	timepoints
timepoints<-	timepoints
timepoints<-,TimeSeriesExperiment-method	timepoints
timeSeries	timeSeries
timeSeries,TimeSeriesExperiment-method	timeSeries
timeSeries<-	timeSeries
timeSeries<-,TimeSeriesExperiment-method	timeSeries
TimeSeriesExperiment	TimeSeriesExperiment
TimeSeriesExperiment-class	TimeSeriesExperiment
TimeSeriesExperiment-constructor	TimeSeriesExperiment
trajectoryDE	trajectoryDE
varianceStabilization	varianceStabilization
