Type: Package
Package: tidySpatialExperiment
Title: SpatialExperiment with tidy principles
Version: 1.2.0
Authors@R: c(
    person("William", "Hutchison", email = "hutchison.w@wehi.edu.au", role = c("aut", "cre"), 
           comment = c(ORCID = "0009-0001-6242-4269")),
    person("Stefano", "Mangiola", email = "mangiolastefano@gmail.com", role = "aut")
  )
Description: tidySpatialExperiment provides a bridge between the SpatialExperiment package and the 
    tidyverse ecosystem. It creates an invisible layer that allows you to interact with a 
    SpatialExperiment object as if it were a tibble; enabling the use of functions from dplyr, 
    tidyr, ggplot2 and plotly. But, underneath, your data remains a SpatialExperiment object.
License: GPL (>= 3)
Depends: R (>= 4.3.0), SpatialExperiment, tidySingleCellExperiment
Imports: ttservice, SummarizedExperiment, SingleCellExperiment,
        BiocGenerics, Matrix, S4Vectors, methods, utils, pkgconfig,
        tibble, dplyr, tidyr, ggplot2, plotly, rlang, purrr, stringr,
        vctrs, tidyselect, pillar, cli, fansi, lifecycle, magick,
        tidygate (>= 1.0.13), shiny
Suggests: BiocStyle, testthat, knitr, markdown, scater, igraph,
        cowplot, DropletUtils, tidySummarizedExperiment
VignetteBuilder: knitr
Biarch: true
biocViews: Infrastructure, RNASeq, GeneExpression, Sequencing, Spatial,
        Transcriptomics, SingleCell
Encoding: UTF-8
RoxygenNote: 7.3.1
Roxygen: list(markdown = TRUE)
URL: https://github.com/william-hutchison/tidySpatialExperiment,
        https://william-hutchison.github.io/tidySpatialExperiment/
BugReports: https://github.com/william-hutchison/tidySpatialExperiment/issues
LazyData: true
git_url: https://git.bioconductor.org/packages/tidySpatialExperiment
git_branch: RELEASE_3_20
git_last_commit: 43d7567
git_last_commit_date: 2024-10-29
Repository: Bioconductor 3.20
Date/Publication: 2024-10-29
NeedsCompilation: no
Packaged: 2024-10-30 03:13:46 UTC; biocbuild
Author: William Hutchison [aut, cre] (<https://orcid.org/0009-0001-6242-4269>),
  Stefano Mangiola [aut]
Maintainer: William Hutchison <hutchison.w@wehi.edu.au>
Built: R 4.4.2; ; 2025-01-04 01:57:21 UTC; unix
