Package: TFEA.ChIP
Type: Package
Title: Analyze Transcription Factor Enrichment
Version: 1.2.1
Author: Laura Puente Santamaría, Luis del Peso
Maintainer: Laura Puente Santamaría <lpsantamaria@iib.uam.es>
Description: Package to analize transcription factor enrichment in a gene set using data from ChIP-Seq experiments.
Depends: R (>= 3.3), dplyr, TxDb.Hsapiens.UCSC.hg19.knownGene,
        org.Hs.eg.db
License: Artistic-2.0
Encoding: UTF-8
LazyData: false
RoxygenNote: 6.0.1
Imports: GenomicRanges, IRanges, biomaRt, GenomicFeatures, grDevices,
        stats, utils, R.utils
Suggests: knitr, rmarkdown, S4Vectors, plotly, scales, tidyr, ggplot2,
        GSEABase, DESeq2, BiocGenerics
VignetteBuilder: knitr
biocViews: Transcription, GeneRegulation, GeneSetEnrichment,
        Transcriptomics, Sequencing, ChIPSeq, RNASeq
NeedsCompilation: no
Packaged: 2018-12-12 02:59:28 UTC; biocbuild
git_url: https://git.bioconductor.org/packages/TFEA.ChIP
git_branch: RELEASE_3_8
git_last_commit: 787a6f5
git_last_commit_date: 2018-12-11
Date/Publication: 2018-12-11
Built: R 3.5.1; ; 2018-12-29 20:17:06 UTC; unix
