DisjointSet	DisjointSet
EstimateRearrangementScenarios	EstimateRearrangementScenarios
ExtractBy	ExtractBy
FindSets	FindSets
Generic	Generic
gffToDataFrame	gffToDataFrame
LinkedPairs-class	LinkedPairs-class
NucleotideOverlap	NucleotideOverlap
PairSummaries	PairSummaries
print.LinkedPairs	LinkedPairs-class
SequenceSimilarity	SequenceSimilarity
SubSetPairs	SubSetPairs
[.LinkedPairs	LinkedPairs-class
