# An R package to automate the analysis of double-strand break repair during meiosis

## Documentation for package ‘synapsis’ version 1.4.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

annotate_foci_counting | annotate_foci_counting
annotate_foci_counting_adjusted | annotate_foci_counting_adjusted
append_data_frame | append_data_frame
auto_crop_fast | auto_crop_fast
count_foci | count_foci
crop_single_object_fast | crop_single_object_fast
get_blobs | get_blobs
get_C1 | get_C1
get_coincident_foci | get_coincident_foci
get_foci_per_cell | get_foci_per_cell
get_overlap_mask | get_overlap_mask
get_pachytene | get_pachytene
keep_cells | keep_cells
make_foci_mask | make_foci_mask
make_strand_mask | make_strand_mask
remove_XY | remove_XY