# This file created by conda-build 3.21.4
# meta.yaml template originally from:
# /opt/recipe, last modified Sun Nov  7 18:27:30 2021
# ------------------------------------------------

package:
  name: bioconductor-structtoolbox
  version: 1.6.0
source:
  md5: c7a451031a9081fcecab431358572282
  url:
    - https://bioarchive.galaxyproject.org/structToolbox_1.6.0.tar.gz
    - https://bioconductor.org/packages/3.14/bioc/src/contrib/structToolbox_1.6.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-structtoolbox/bioconductor-structtoolbox_1.6.0_src_all.tar.gz
build:
  noarch: generic
  number: '0'
  rpaths:
    - lib/
    - lib/R/lib/
  string: r41hdfd78af_0
requirements:
  host:
    - _libgcc_mutex 0.1 conda_forge
    - _openmp_mutex 4.5 1_gnu
    - _r-mutex 1.0.1 anacondar_1
    - binutils_impl_linux-64 2.36.1 h193b22a_2
    - binutils_linux-64 2.36 hf3e587d_1
    - bioconductor-biobase 2.54.0 r41hd029910_0
    - bioconductor-biocgenerics 0.40.0 r41hdfd78af_0
    - bioconductor-delayedarray 0.20.0 r41hd029910_0
    - bioconductor-genomeinfodb 1.30.0 r41hdfd78af_0
    - bioconductor-genomeinfodbdata 1.2.7 r41hdfd78af_0
    - bioconductor-genomicranges 1.46.0 r41hd029910_0
    - bioconductor-iranges 2.28.0 r41hd029910_0
    - bioconductor-matrixgenerics 1.6.0 r41hdfd78af_0
    - bioconductor-rols 2.22.0 r41hdfd78af_0
    - bioconductor-s4vectors 0.32.0 r41hd029910_0
    - bioconductor-struct 1.6.0 r41hdfd78af_0
    - bioconductor-summarizedexperiment 1.24.0 r41hdfd78af_0
    - bioconductor-xvector 0.34.0 r41hd029910_0
    - bioconductor-zlibbioc 1.40.0 r41hd029910_0
    - bwidget 1.9.14 ha770c72_1
    - bzip2 1.0.8 h7f98852_4
    - c-ares 1.18.1 h7f98852_0
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    - font-ttf-source-code-pro 2.038 h77eed37_0
    - font-ttf-ubuntu 0.83 hab24e00_0
    - fontconfig 2.13.1 hba837de_1005
    - fonts-conda-ecosystem 1 0
    - fonts-conda-forge 1 0
    - freetype 2.10.4 h0708190_1
    - fribidi 1.0.10 h36c2ea0_0
    - gcc_impl_linux-64 9.4.0 h03d3576_11
    - gcc_linux-64 9.4.0 h391b98a_1
    - gettext 0.19.8.1 h73d1719_1008
    - gfortran_impl_linux-64 9.4.0 h0003116_11
    - gfortran_linux-64 9.4.0 hf0ab688_1
    - graphite2 1.3.13 h58526e2_1001
    - gsl 2.7 he838d99_0
    - gxx_impl_linux-64 9.4.0 h03d3576_11
    - gxx_linux-64 9.4.0 h0316aca_1
    - harfbuzz 3.1.0 h83ec7ef_0
    - icu 68.2 h9c3ff4c_0
    - jbig 2.1 h7f98852_2003
    - jpeg 9d h36c2ea0_0
    - kernel-headers_linux-64 2.6.32 he073ed8_15
    - krb5 1.19.2 h48eae69_3
    - ld_impl_linux-64 2.36.1 hea4e1c9_2
    - lerc 3.0 h9c3ff4c_0
    - libblas 3.9.0 12_linux64_openblas
    - libcblas 3.9.0 12_linux64_openblas
    - libcurl 7.79.1 h494985f_1
    - libdeflate 1.8 h7f98852_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 h516909a_1
    - libffi 3.4.2 h9c3ff4c_4
    - libgcc-devel_linux-64 9.4.0 hd854feb_11
    - libgcc-ng 11.2.0 h1d223b6_11
    - libgfortran-ng 11.2.0 h69a702a_11
    - libgfortran5 11.2.0 h5c6108e_11
    - libglib 2.70.0 h174f98d_1
    - libgomp 11.2.0 h1d223b6_11
    - libiconv 1.16 h516909a_0
    - liblapack 3.9.0 12_linux64_openblas
    - libnghttp2 1.43.0 ha19adfc_1
    - libopenblas 0.3.18 pthreads_h8fe5266_0
    - libpng 1.6.37 h21135ba_2
    - libsanitizer 9.4.0 h79bfe98_11
    - libssh2 1.10.0 ha35d2d1_2
    - libstdcxx-devel_linux-64 9.4.0 hd854feb_11
    - libstdcxx-ng 11.2.0 he4da1e4_11
    - libtiff 4.3.0 h6f004c6_2
    - libuuid 2.32.1 h7f98852_1000
    - libwebp-base 1.2.1 h7f98852_0
    - libxcb 1.13 h7f98852_1003
    - libxml2 2.9.12 h72842e0_0
    - libzlib 1.2.11 h36c2ea0_1013
    - lz4-c 1.9.3 h9c3ff4c_1
    - make 4.3 hd18ef5c_1
    - ncurses 6.2 h58526e2_4
    - openssl 3.0.0 h7f98852_2
    - pango 1.48.10 h54213e6_2
    - pcre 8.45 h9c3ff4c_0
    - pcre2 10.37 h032f7d1_0
    - pixman 0.40.0 h36c2ea0_0
    - pthread-stubs 0.4 h36c2ea0_1001
    - r-askpass 1.1 r41hcfec24a_2
    - r-assertthat 0.2.1 r41hc72bb7e_2
    - r-backports 1.3.0 r41hcfec24a_0
    - r-base 4.1.1 hb93adac_1
    - r-bitops 1.0_7 r41hcfec24a_0
    - r-brio 1.1.2 r41hcfec24a_0
    - r-callr 3.7.0 r41hc72bb7e_0
    - r-cli 3.1.0 r41h03ef668_0
    - r-colorspace 2.0_2 r41hcfec24a_0
    - r-crayon 1.4.2 r41hc72bb7e_0
    - r-curl 4.3.2 r41hcfec24a_0
    - r-desc 1.4.0 r41hc72bb7e_0
    - r-diffobj 0.3.5 r41hcfec24a_0
    - r-digest 0.6.28 r41h03ef668_0
    - r-ellipsis 0.3.2 r41hcfec24a_0
    - r-evaluate 0.14 r41hc72bb7e_2
    - r-fansi 0.4.2 r41hcfec24a_0
    - r-farver 2.1.0 r41h03ef668_0
    - r-ggplot2 3.3.5 r41hc72bb7e_0
    - r-ggthemes 4.2.4 r41hc72bb7e_0
    - r-glue 1.5.0 r41hcfec24a_0
    - r-gridextra 2.3 r41hc72bb7e_1003
    - r-gtable 0.3.0 r41hc72bb7e_3
    - r-highr 0.9 r41hc72bb7e_0
    - r-hms 1.1.1 r41hc72bb7e_0
    - r-httr 1.4.2 r41hc72bb7e_0
    - r-isoband 0.2.5 r41h03ef668_0
    - r-jsonlite 1.7.2 r41hcfec24a_0
    - r-knitr 1.35 r41hc72bb7e_0
    - r-labeling 0.4.2 r41hc72bb7e_0
    - r-lattice 0.20_45 r41hcfec24a_0
    - r-lifecycle 1.0.1 r41hc72bb7e_0
    - r-magrittr 2.0.1 r41hcfec24a_1
    - r-markdown 1.1 r41hcfec24a_1
    - r-mass 7.3_54 r41hcfec24a_0
    - r-matrix 1.3_4 r41he454529_0
    - r-matrixstats 0.61.0 r41hcfec24a_0
    - r-mgcv 1.8_38 r41he454529_0
    - r-mime 0.12 r41hcfec24a_0
    - r-munsell 0.5.0 r41hc72bb7e_1003
    - r-nlme 3.1_153 r41h859d828_0
    - r-ontologyindex 2.7 r41hc72bb7e_0
    - r-openssl 1.4.5 r41he82ab30_1
    - r-pillar 1.6.4 r41hc72bb7e_0
    - r-pkgconfig 2.0.3 r41hc72bb7e_1
    - r-pkgload 1.2.3 r41h03ef668_0
    - r-praise 1.0.0 r41hc72bb7e_1004
    - r-prettyunits 1.1.1 r41hc72bb7e_1
    - r-processx 3.5.2 r41hcfec24a_0
    - r-progress 1.2.2 r41hc72bb7e_2
    - r-ps 1.6.0 r41hcfec24a_0
    - r-purrr 0.3.4 r41hcfec24a_1
    - r-r6 2.5.1 r41hc72bb7e_0
    - r-rcolorbrewer 1.1_2 r41h785f33e_1003
    - r-rcpp 1.0.7 r41h03ef668_0
    - r-rcurl 1.98_1.5 r41hcfec24a_0
    - r-rematch2 2.1.2 r41hc72bb7e_1
    - r-rlang 0.4.12 r41hcfec24a_0
    - r-rprojroot 2.0.2 r41hc72bb7e_0
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    - r-scales 1.1.1 r41hc72bb7e_0
    - r-sp 1.4_5 r41hcfec24a_0
    - r-stringi 1.7.5 r41hcabe038_0
    - r-stringr 1.4.0 r41hc72bb7e_2
    - r-sys 3.4 r41hcfec24a_0
    - r-testthat 3.1.0 r41h03ef668_0
    - r-tibble 3.1.5 r41hcfec24a_0
    - r-utf8 1.2.2 r41hcfec24a_0
    - r-vctrs 0.3.8 r41hcfec24a_1
    - r-viridislite 0.4.0 r41hc72bb7e_0
    - r-waldo 0.3.1 r41hc72bb7e_0
    - r-withr 2.4.2 r41hc72bb7e_0
    - r-xfun 0.28 r41h03ef668_0
    - r-yaml 2.2.1 r41hcfec24a_1
    - readline 8.1 h46c0cb4_0
    - sed 4.8 he412f7d_0
    - sysroot_linux-64 2.12 he073ed8_15
    - tk 8.6.11 h27826a3_1
    - tktable 2.10 hb7b940f_3
    - xorg-kbproto 1.0.7 h7f98852_1002
    - xorg-libice 1.0.10 h7f98852_0
    - xorg-libsm 1.2.3 hd9c2040_1000
    - xorg-libx11 1.7.2 h7f98852_0
    - xorg-libxau 1.0.9 h7f98852_0
    - xorg-libxdmcp 1.1.3 h7f98852_0
    - xorg-libxext 1.3.4 h7f98852_1
    - xorg-libxrender 0.9.10 h7f98852_1003
    - xorg-libxt 1.2.1 h7f98852_2
    - xorg-renderproto 0.11.1 h7f98852_1002
    - xorg-xextproto 7.3.0 h7f98852_1002
    - xorg-xproto 7.0.31 h7f98852_1007
    - xz 5.2.5 h516909a_1
    - zlib 1.2.11 h36c2ea0_1013
    - zstd 1.5.0 ha95c52a_0
  run:
    - bioconductor-struct >=1.6.0,<1.7.0
    - r-base >=4.1,<4.2.0a0
    - r-ggplot2
    - r-ggthemes
    - r-gridextra
    - r-scales
    - r-sp
test:
  commands:
    - $R -e "library('structToolbox')"
about:
  description: "An extensive set of data (pre-)processing and analysis methods and\
    \ tools for metabolomics and other omics, with a strong emphasis on statistics\
    \ and machine learning. This toolbox allows the user to build extensive and standardised\
    \ workflows for data analysis. The methods and tools have been implemented using\
    \ class-based templates provided by the struct (Statistics in R Using Class-based\
    \ Templates) package. The toolbox includes pre-processing methods (e.g. signal\
    \ drift and batch correction, normalisation, missing value imputation and scaling),\
    \ univariate (e.g. ttest, various forms of ANOVA, Kruskal\u2013Wallis test and\
    \ more) and multivariate statistical methods (e.g. PCA and PLS, including cross-validation\
    \ and permutation testing) as well as machine learning methods (e.g. Support Vector\
    \ Machines). The STATistics Ontology (STATO) has been integrated and implemented\
    \ to provide standardised definitions for the different methods, inputs and outputs."
  home: https://bioconductor.org/packages/3.14/bioc/html/structToolbox.html
  license: GPL-3
  license_file: /opt/conda/conda-bld/bioconductor-structtoolbox_1636318486278/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeh/lib/R/share/licenses/GPL-3
  summary: Data processing & analysis tools for Metabolomics and other omics
extra:
  copy_test_source_files: true
  final: true
