strandCheckR-package	strandCheckR-package
.calculateStrandCoverage	dot-calculateStrandCoverage
.calculateStrandNbReads	dot-calculateStrandNbReads
.concatenateAlignments	dot-concatenateAlignments
.getWinInSequence	dot-getWinInSequence
.keptProbaWin	dot-keptProbaWin
.keptReadFragment	dot-keptReadFragment
.sequenceInfoInPartition	dot-sequenceInfoInPartition
.summarizeHist	dot-summarizeHist
checkPairedEnd	checkPairedEnd
filterDNA	filterDNA
getStrandFromBamFile	getStrandFromBamFile
getStrandFromReadInfo	getStrandFromReadInfo
getWinOverlapEachIRange	getWinOverlapEachIRange
getWinOverlapEachReadFragment	getWinOverlapEachReadFragment
getWinOverlapGRanges	getWinOverlapGRanges
intersectWithFeature	intersectWithFeature
plotHist	plotHist
plotWin	plotWin
strandCheckR	strandCheckR-package
