# This file created by conda-build 24.7.1
# meta.yaml template originally from:
# /opt/recipe, last modified Sat Dec 21 03:46:12 2024
# ------------------------------------------------

package:
  name: bioconductor-sponge
  version: 1.28.0
source:
  md5: 2133e52cd4046b2fa7e40988ac2cdc0c
  url:
    - https://bioarchive.galaxyproject.org/SPONGE_1.28.0.tar.gz
    - https://bioconductor.org/packages/3.20/bioc/src/contrib/Archive/SPONGE/SPONGE_1.28.0.tar.gz
    - https://bioconductor.org/packages/3.20/bioc/src/contrib/SPONGE_1.28.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-sponge/bioconductor-sponge_1.28.0_src_all.tar.gz
build:
  noarch: generic
  number: '0'
  rpaths:
    - lib/
    - lib/R/lib/
  run_exports: bioconductor-sponge >=1.28.0,<1.29.0a0
  string: r44hdfd78af_0
requirements:
  host:
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    - _openmp_mutex 4.5 2_gnu
    - _r-mutex 1.0.1 anacondar_1
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    - readline 8.2 h8228510_1
    - sed 4.8 he412f7d_0
    - setuptools 75.6.0 pyhff2d567_1
    - sysroot_linux-64 2.17 h4a8ded7_18
    - tk 8.6.13 noxft_h4845f30_101
    - tktable 2.10 h8bc8fbc_6
    - toml 0.10.2 pyhd8ed1ab_1
    - tomlkit 0.13.2 pyha770c72_1
    - tzdata 2024b hc8b5060_0
    - xmltodict 0.14.2 pyhd8ed1ab_1
    - xorg-libice 1.1.2 hb9d3cd8_0
    - xorg-libsm 1.2.5 he73a12e_0
    - xorg-libx11 1.8.10 h4f16b4b_1
    - xorg-libxau 1.0.12 hb9d3cd8_0
    - xorg-libxdmcp 1.1.5 hb9d3cd8_0
    - xorg-libxext 1.3.6 hb9d3cd8_0
    - xorg-libxrender 0.9.12 hb9d3cd8_0
    - xorg-libxt 1.3.1 hb9d3cd8_0
    - yaml 0.2.5 h7f98852_2
    - yq 3.4.3 pyhd8ed1ab_1
    - zstd 1.5.6 ha6fb4c9_0
  run:
    - bioconductor-biobase >=2.66.0,<2.67.0
    - bioconductor-biomart >=2.62.0,<2.63.0
    - bioconductor-complexheatmap >=2.22.0,<2.23.0
    - r-base >=4.4,<4.5.0a0
    - r-base >=4.4,<4.5.0a0
    - r-caret
    - r-cvms
    - r-data.table
    - r-dorng
    - r-dplyr
    - r-expm
    - r-foreach
    - r-ggplot2
    - r-ggpubr
    - r-ggridges
    - r-glmnet
    - r-grbase
    - r-igraph
    - r-iterators
    - r-logging
    - r-mass
    - r-metbrewer
    - r-ppcor
    - r-randomforest
    - r-rlang
    - r-stringr
    - r-tidyr
    - r-tidyverse
    - r-tnet
test:
  commands:
    - $R -e "library('SPONGE')"
about:
  description: 'This package provides methods to efficiently detect competitive endogeneous
    RNA interactions between two genes. Such interactions are mediated by one or several
    miRNAs such that both gene and miRNA expression data for a larger number of samples
    is needed as input. The SPONGE package now also includes spongEffects: ceRNA modules
    offer patient-specific insights into the miRNA regulatory landscape.'
  home: https://bioconductor.org/packages/3.20/bioc/html/SPONGE.html
  license: GPL (>=3)
  license_file: /opt/conda/conda-bld/bioconductor-sponge_1734758475777/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/lib/R/share/licenses/GPL-3
  summary: Sparse Partial Correlations On Gene Expression
extra:
  copy_test_source_files: true
  final: true
